RNA–Protein interactions for RNA: ENST00000419357.5

LINC00243-202, long intergenic non-protein coding RNA 243, humanhuman

TSL 3

Gene LINC00243, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-202ENST00000419357 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
LINC00243-202ENST00000419357 CHIC1Q5VXU3 224 aa18.06■□□□□ 0.48
LINC00243-202ENST00000419357 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
LINC00243-202ENST00000419357 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
LINC00243-202ENST00000419357 FOXD1Q16676 465 aa14.86□□□□□ -0.03
LINC00243-202ENST00000419357 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
LINC00243-202ENST00000419357 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
LINC00243-202ENST00000419357 MSH5O43196 834 aa14.07□□□□□ -0.16
LINC00243-202ENST00000419357 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
LINC00243-202ENST00000419357 ADRA2BP18089 450 aa13.99□□□□□ -0.17
LINC00243-202ENST00000419357 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
LINC00243-202ENST00000419357 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
LINC00243-202ENST00000419357 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
LINC00243-202ENST00000419357 KCNA4P22459 653 aa12.69□□□□□ -0.38
LINC00243-202ENST00000419357 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
LINC00243-202ENST00000419357 DMRT2Q9Y5R5 561 aa12.6□□□□□ -0.39
LINC00243-202ENST00000419357 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
LINC00243-202ENST00000419357 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
LINC00243-202ENST00000419357 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
LINC00243-202ENST00000419357 RNF216Q9NWF9 866 aaPredicted RBP12.32□□□□□ -0.44
LINC00243-202ENST00000419357 HOXD11P31277 338 aaPredicted RBP12.27□□□□□ -0.45
LINC00243-202ENST00000419357 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
LINC00243-202ENST00000419357 DNAJC5BQ9UF47 199 aa12.13□□□□□ -0.47
LINC00243-202ENST00000419357 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
LINC00243-202ENST00000419357 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
LINC00243-202ENST00000419357 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
LINC00243-202ENST00000419357 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
LINC00243-202ENST00000419357 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
LINC00243-202ENST00000419357 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
LINC00243-202ENST00000419357 ZBTB22O15209 634 aa11.68□□□□□ -0.54
LINC00243-202ENST00000419357 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
LINC00243-202ENST00000419357 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
LINC00243-202ENST00000419357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00243-202ENST00000419357 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
LINC00243-202ENST00000419357 MYCNP04198 464 aaPredicted RBP11.46□□□□□ -0.57
LINC00243-202ENST00000419357 ABCC9O60706 1549 aa11.42□□□□□ -0.58
LINC00243-202ENST00000419357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.33□□□□□ -0.6
LINC00243-202ENST00000419357 HNRNPUL2Q1KMD3 747 aaKnown RBP11.33□□□□□ -0.6
LINC00243-202ENST00000419357 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
LINC00243-202ENST00000419357 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
LINC00243-202ENST00000419357 ATXN8OSP0DMR3 200 aa11.27□□□□□ -0.61
LINC00243-202ENST00000419357 APLP2Q06481 763 aa11.19□□□□□ -0.62
LINC00243-202ENST00000419357 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
LINC00243-202ENST00000419357 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
LINC00243-202ENST00000419357 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
LINC00243-202ENST00000419357 DSG3P32926 999 aa11.09□□□□□ -0.63
LINC00243-202ENST00000419357 CAPN15O75808 1086 aa11.08□□□□□ -0.64
LINC00243-202ENST00000419357 POTEHQ6S545 545 aa11.06□□□□□ -0.64
LINC00243-202ENST00000419357 ZNF219Q9P2Y4 722 aaPredicted RBP11.04□□□□□ -0.64
LINC00243-202ENST00000419357 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
LINC00243-202ENST00000419357 POLA2Q14181 598 aa10.89□□□□□ -0.67
LINC00243-202ENST00000419357 ABCB7O75027 752 aa10.85□□□□□ -0.67
LINC00243-202ENST00000419357 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.69
LINC00243-202ENST00000419357 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
LINC00243-202ENST00000419357 FBLN2P98095 1184 aa10.66□□□□□ -0.7
LINC00243-202ENST00000419357 RBM42Q9BTD8 480 aaKnown RBP10.64□□□□□ -0.71
LINC00243-202ENST00000419357 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00243-202ENST00000419357 FKBP8Q14318 412 aa10.49□□□□□ -0.73
LINC00243-202ENST00000419357 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
LINC00243-202ENST00000419357 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
LINC00243-202ENST00000419357 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
LINC00243-202ENST00000419357 TRIM41Q8WV44 630 aa10.44□□□□□ -0.74
LINC00243-202ENST00000419357 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
LINC00243-202ENST00000419357 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
LINC00243-202ENST00000419357 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
LINC00243-202ENST00000419357 CCDC180Q9P1Z9 1646 aa10.38□□□□□ -0.75
LINC00243-202ENST00000419357 ZNF692Q9BU19 519 aaPredicted RBP10.38□□□□□ -0.75
LINC00243-202ENST00000419357 RB1CC1Q8TDY2 1594 aa10.38□□□□□ -0.75
LINC00243-202ENST00000419357 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
LINC00243-202ENST00000419357 PROM2Q8N271 834 aa10.34□□□□□ -0.75
LINC00243-202ENST00000419357 CECR2Q9BXF3 1484 aa10.33□□□□□ -0.76
LINC00243-202ENST00000419357 AKT1S1Q96B36 256 aa10.32□□□□□ -0.76
LINC00243-202ENST00000419357 SP7Q8TDD2 431 aaPredicted RBP10.24□□□□□ -0.77
LINC00243-202ENST00000419357 DCAF8L2P0C7V8 631 aa10.21□□□□□ -0.77
LINC00243-202ENST00000419357 REM2Q8IYK8 340 aaPredicted RBP10.2□□□□□ -0.78
LINC00243-202ENST00000419357 CC2D2AQ9P2K1 1620 aa10.19□□□□□ -0.78
LINC00243-202ENST00000419357 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
LINC00243-202ENST00000419357 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
LINC00243-202ENST00000419357 FBXO3Q9UK99 471 aa10.11□□□□□ -0.79
LINC00243-202ENST00000419357 BICRAQ9NZM4 1560 aa10.1□□□□□ -0.79
LINC00243-202ENST00000419357 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
LINC00243-202ENST00000419357 STAG3Q9UJ98 1225 aa10.1□□□□□ -0.79
LINC00243-202ENST00000419357 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
LINC00243-202ENST00000419357 NACADO15069 1562 aa10.08□□□□□ -0.8
LINC00243-202ENST00000419357 FXR2P51116 673 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC00243-202ENST00000419357 CUX2O14529 1486 aa10.05□□□□□ -0.8
LINC00243-202ENST00000419357 HAX1O00165 279 aa10.05□□□□□ -0.8
LINC00243-202ENST00000419357 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
LINC00243-202ENST00000419357 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
LINC00243-202ENST00000419357 VASPP50552 380 aaPredicted RBP9.97□□□□□ -0.81
LINC00243-202ENST00000419357 EIF4G1Q04637 1599 aaKnown RBP9.94□□□□□ -0.82
LINC00243-202ENST00000419357 MIER1Q8N108 512 aa9.9□□□□□ -0.82
LINC00243-202ENST00000419357 ERCC6Q03468 1493 aa9.9□□□□□ -0.83
LINC00243-202ENST00000419357 CREBZFQ9NS37 354 aa9.88□□□□□ -0.83
LINC00243-202ENST00000419357 EVX2Q03828 476 aa9.87□□□□□ -0.83
LINC00243-202ENST00000419357 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
LINC00243-202ENST00000419357 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
LINC00243-202ENST00000419357 PRKAR2AP13861 404 aaKnown RBP9.82□□□□□ -0.84
LINC00243-202ENST00000419357 PLEKHG5O94827 1062 aa9.81□□□□□ -0.84
LINC00243-202ENST00000419357 MNX1P50219 401 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms