RNA–Protein interactions for RNA: ENST00000479467.5

PHC3-207, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-207ENST00000479467 AEBP2Q6ZN18 517 aaPredicted RBP20.9■□□□□ 0.94
PHC3-207ENST00000479467 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
PHC3-207ENST00000479467 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
PHC3-207ENST00000479467 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
PHC3-207ENST00000479467 FOXD1Q16676 465 aa16.65■□□□□ 0.26
PHC3-207ENST00000479467 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
PHC3-207ENST00000479467 MSH5O43196 834 aa15.67■□□□□ 0.1
PHC3-207ENST00000479467 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
PHC3-207ENST00000479467 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
PHC3-207ENST00000479467 ADRA2BP18089 450 aa15.5■□□□□ 0.07
PHC3-207ENST00000479467 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
PHC3-207ENST00000479467 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
PHC3-207ENST00000479467 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
PHC3-207ENST00000479467 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
PHC3-207ENST00000479467 PPP4R3CPQ6ZMV5 832 aa13.94□□□□□ -0.18
PHC3-207ENST00000479467 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
PHC3-207ENST00000479467 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
PHC3-207ENST00000479467 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
PHC3-207ENST00000479467 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
PHC3-207ENST00000479467 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
PHC3-207ENST00000479467 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
PHC3-207ENST00000479467 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
PHC3-207ENST00000479467 KCNA4P22459 653 aa13.32□□□□□ -0.28
PHC3-207ENST00000479467 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
PHC3-207ENST00000479467 NPM3O75607 178 aaKnown RBP13.19□□□□□ -0.3
PHC3-207ENST00000479467 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
PHC3-207ENST00000479467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■□□□ 11.4
PHC3-207ENST00000479467 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
PHC3-207ENST00000479467 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
PHC3-207ENST00000479467 CAPN15O75808 1086 aa12.58□□□□□ -0.4
PHC3-207ENST00000479467 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
PHC3-207ENST00000479467 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
PHC3-207ENST00000479467 APLP2Q06481 763 aa12.51□□□□□ -0.41
PHC3-207ENST00000479467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
PHC3-207ENST00000479467 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
PHC3-207ENST00000479467 DSG3P32926 999 aa12.46□□□□□ -0.41
PHC3-207ENST00000479467 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
PHC3-207ENST00000479467 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
PHC3-207ENST00000479467 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
PHC3-207ENST00000479467 ZBTB22O15209 634 aa12.34□□□□□ -0.43
PHC3-207ENST00000479467 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
PHC3-207ENST00000479467 ABCB7O75027 752 aa12.25□□□□□ -0.45
PHC3-207ENST00000479467 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
PHC3-207ENST00000479467 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
PHC3-207ENST00000479467 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
PHC3-207ENST00000479467 POLA2Q14181 598 aa12.03□□□□□ -0.48
PHC3-207ENST00000479467 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
PHC3-207ENST00000479467 POTEHQ6S545 545 aa11.97□□□□□ -0.49
PHC3-207ENST00000479467 ATF5Q9Y2D1 282 aaPredicted RBP11.88□□□□□ -0.51
PHC3-207ENST00000479467 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
PHC3-207ENST00000479467 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
PHC3-207ENST00000479467 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
PHC3-207ENST00000479467 AKT1S1Q96B36 256 aa11.67□□□□□ -0.54
PHC3-207ENST00000479467 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
PHC3-207ENST00000479467 FBLN2P98095 1184 aa11.55□□□□□ -0.56
PHC3-207ENST00000479467 REM2Q8IYK8 340 aaPredicted RBP11.53□□□□□ -0.56
PHC3-207ENST00000479467 SPDYE2BA6NHP3 402 aa11.44□□□□□ -0.58
PHC3-207ENST00000479467 SPDYE6P0CI01 402 aa11.44□□□□□ -0.58
PHC3-207ENST00000479467 SPDYE2Q495Y8 402 aa11.44□□□□□ -0.58
PHC3-207ENST00000479467 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
PHC3-207ENST00000479467 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
PHC3-207ENST00000479467 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
PHC3-207ENST00000479467 NISCHQ9Y2I1 1504 aa11.31□□□□□ -0.6
PHC3-207ENST00000479467 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
PHC3-207ENST00000479467 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
PHC3-207ENST00000479467 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
PHC3-207ENST00000479467 SSUH2Q9Y2M2 353 aa11.25□□□□□ -0.61
PHC3-207ENST00000479467 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
PHC3-207ENST00000479467 SP7Q8TDD2 431 aaPredicted RBP11.22□□□□□ -0.61
PHC3-207ENST00000479467 HAX1O00165 279 aa11.21□□□□□ -0.61
PHC3-207ENST00000479467 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
PHC3-207ENST00000479467 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
PHC3-207ENST00000479467 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
PHC3-207ENST00000479467 EVX2Q03828 476 aa10.97□□□□□ -0.65
PHC3-207ENST00000479467 CHADLQ6NUI6 762 aa10.96□□□□□ -0.65
PHC3-207ENST00000479467 FKBP8Q14318 412 aa10.95□□□□□ -0.66
PHC3-207ENST00000479467 C19orf67A6NJJ6 358 aa10.94□□□□□ -0.66
PHC3-207ENST00000479467 SPDYE4A6NLX3 237 aa10.91□□□□□ -0.66
PHC3-207ENST00000479467 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
PHC3-207ENST00000479467 PROM2Q8N271 834 aa10.84□□□□□ -0.67
PHC3-207ENST00000479467 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
PHC3-207ENST00000479467 GABBR2O75899 941 aa10.78□□□□□ -0.68
PHC3-207ENST00000479467 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
PHC3-207ENST00000479467 ABCC9O60706 1549 aa10.73□□□□□ -0.69
PHC3-207ENST00000479467 CLCN6P51797 869 aa10.72□□□□□ -0.69
PHC3-207ENST00000479467 CREBZFQ9NS37 354 aa10.71□□□□□ -0.69
PHC3-207ENST00000479467 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
PHC3-207ENST00000479467 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
PHC3-207ENST00000479467 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
PHC3-207ENST00000479467 ZNF579Q8NAF0 562 aaKnown RBP10.59□□□□□ -0.71
PHC3-207ENST00000479467 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
PHC3-207ENST00000479467 LHX8Q68G74 356 aa10.54□□□□□ -0.72
PHC3-207ENST00000479467 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
PHC3-207ENST00000479467 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
PHC3-207ENST00000479467 PLEKHG5O94827 1062 aa10.47□□□□□ -0.73
PHC3-207ENST00000479467 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
PHC3-207ENST00000479467 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
PHC3-207ENST00000479467 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
PHC3-207ENST00000479467 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
PHC3-207ENST00000479467 MIER1Q8N108 512 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms