RNA–Protein interactions for RNA: ENST00000466189.5

PHC3-202, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-202ENST00000466189 AEBP2Q6ZN18 517 aaPredicted RBP18.9■□□□□ 0.62
PHC3-202ENST00000466189 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
PHC3-202ENST00000466189 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
PHC3-202ENST00000466189 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
PHC3-202ENST00000466189 PLPPR3Q6T4P5 718 aa14.87□□□□□ -0.03
PHC3-202ENST00000466189 FOXD1Q16676 465 aa14.86□□□□□ -0.03
PHC3-202ENST00000466189 ADRA2BP18089 450 aa14.36□□□□□ -0.11
PHC3-202ENST00000466189 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
PHC3-202ENST00000466189 NISCHQ9Y2I1 1504 aa14.11□□□□□ -0.15
PHC3-202ENST00000466189 PIAS4Q8N2W9 510 aaPredicted RBP14.01□□□□□ -0.17
PHC3-202ENST00000466189 MSH5O43196 834 aa13.85□□□□□ -0.19
PHC3-202ENST00000466189 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
PHC3-202ENST00000466189 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PHC3-202ENST00000466189 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
PHC3-202ENST00000466189 KCNA4P22459 653 aa12.92□□□□□ -0.34
PHC3-202ENST00000466189 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
PHC3-202ENST00000466189 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
PHC3-202ENST00000466189 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
PHC3-202ENST00000466189 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
PHC3-202ENST00000466189 CCDC180Q9P1Z9 1646 aa12.66□□□□□ -0.38
PHC3-202ENST00000466189 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
PHC3-202ENST00000466189 ABCC9O60706 1549 aa12.55□□□□□ -0.4
PHC3-202ENST00000466189 RNF216Q9NWF9 866 aaPredicted RBP12.47□□□□□ -0.41
PHC3-202ENST00000466189 HOXD11P31277 338 aaPredicted RBP12.42□□□□□ -0.42
PHC3-202ENST00000466189 DCAF8L1A6NGE4 600 aa12.32□□□□□ -0.44
PHC3-202ENST00000466189 SLC4A1APQ9BWU0 796 aaKnown RBP12.26□□□□□ -0.45
PHC3-202ENST00000466189 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
PHC3-202ENST00000466189 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
PHC3-202ENST00000466189 RB1CC1Q8TDY2 1594 aa11.98□□□□□ -0.49
PHC3-202ENST00000466189 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
PHC3-202ENST00000466189 NACADO15069 1562 aa11.92□□□□□ -0.5
PHC3-202ENST00000466189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.51e-6■■□□□ 11.4
PHC3-202ENST00000466189 ZBTB22O15209 634 aa11.91□□□□□ -0.5
PHC3-202ENST00000466189 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
PHC3-202ENST00000466189 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
PHC3-202ENST00000466189 CSRNP3Q8WYN3 585 aa11.81□□□□□ -0.52
PHC3-202ENST00000466189 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
PHC3-202ENST00000466189 MYO15BQ96JP2 1530 aa11.79□□□□□ -0.52
PHC3-202ENST00000466189 RNF39Q9H2S5 420 aa11.74□□□□□ -0.53
PHC3-202ENST00000466189 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
PHC3-202ENST00000466189 BICRAQ9NZM4 1560 aa11.71□□□□□ -0.53
PHC3-202ENST00000466189 PABPN1Q86U42 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
PHC3-202ENST00000466189 ZCCHC6Q5VYS8 1495 aaKnown RBP11.69□□□□□ -0.54
PHC3-202ENST00000466189 C1QBPQ07021 282 aaKnown RBP11.68□□□□□ -0.54
PHC3-202ENST00000466189 DCAF1Q9Y4B6 1507 aa11.66□□□□□ -0.54
PHC3-202ENST00000466189 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
PHC3-202ENST00000466189 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
PHC3-202ENST00000466189 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
PHC3-202ENST00000466189 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
PHC3-202ENST00000466189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.46□□□□□ -0.57
PHC3-202ENST00000466189 HNRNPUL2Q1KMD3 747 aaKnown RBP11.46□□□□□ -0.57
PHC3-202ENST00000466189 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
PHC3-202ENST00000466189 SHROOM4Q9ULL8 1493 aa11.45□□□□□ -0.58
PHC3-202ENST00000466189 APLP2Q06481 763 aa11.45□□□□□ -0.58
PHC3-202ENST00000466189 SAMD1Q6SPF0 538 aaPredicted RBP11.42□□□□□ -0.58
PHC3-202ENST00000466189 CAPN15O75808 1086 aa11.4□□□□□ -0.58
PHC3-202ENST00000466189 CC2D2AQ9P2K1 1620 aa11.38□□□□□ -0.59
PHC3-202ENST00000466189 TRHP20396 242 aaPredicted RBP11.36□□□□□ -0.59
PHC3-202ENST00000466189 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
PHC3-202ENST00000466189 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
PHC3-202ENST00000466189 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
PHC3-202ENST00000466189 ABCB7O75027 752 aa11.24□□□□□ -0.61
PHC3-202ENST00000466189 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
PHC3-202ENST00000466189 DSG3P32926 999 aa11.15□□□□□ -0.62
PHC3-202ENST00000466189 POLA2Q14181 598 aa11.13□□□□□ -0.63
PHC3-202ENST00000466189 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
PHC3-202ENST00000466189 SMARCA4P51532 1647 aa11□□□□□ -0.65
PHC3-202ENST00000466189 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
PHC3-202ENST00000466189 SMARCA2P51531 1590 aa10.93□□□□□ -0.66
PHC3-202ENST00000466189 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
PHC3-202ENST00000466189 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
PHC3-202ENST00000466189 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
PHC3-202ENST00000466189 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
PHC3-202ENST00000466189 MROH2BQ7Z745 1585 aa10.89□□□□□ -0.67
PHC3-202ENST00000466189 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
PHC3-202ENST00000466189 FBLN2P98095 1184 aa10.84□□□□□ -0.67
PHC3-202ENST00000466189 NESP48681 1621 aa10.84□□□□□ -0.67
PHC3-202ENST00000466189 BAZ1BQ9UIG0 1483 aaKnown RBP10.83□□□□□ -0.68
PHC3-202ENST00000466189 WIZO95785 1651 aa10.79□□□□□ -0.68
PHC3-202ENST00000466189 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
PHC3-202ENST00000466189 CUX2O14529 1486 aa10.78□□□□□ -0.68
PHC3-202ENST00000466189 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
PHC3-202ENST00000466189 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
PHC3-202ENST00000466189 LAMC3Q9Y6N6 1575 aa10.75□□□□□ -0.69
PHC3-202ENST00000466189 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
PHC3-202ENST00000466189 RBM42Q9BTD8 480 aaKnown RBP10.73□□□□□ -0.69
PHC3-202ENST00000466189 THOC2Q8NI27 1593 aaKnown RBP10.72□□□□□ -0.69
PHC3-202ENST00000466189 FKBP8Q14318 412 aa10.7□□□□□ -0.7
PHC3-202ENST00000466189 RSF1Q96T23 1441 aaPredicted RBP10.67□□□□□ -0.7
PHC3-202ENST00000466189 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.7
PHC3-202ENST00000466189 PDS5BQ9NTI5 1447 aa10.64□□□□□ -0.71
PHC3-202ENST00000466189 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
PHC3-202ENST00000466189 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
PHC3-202ENST00000466189 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
PHC3-202ENST00000466189 CFTRP13569 1480 aa10.56□□□□□ -0.72
PHC3-202ENST00000466189 SPDYE2BA6NHP3 402 aa10.56□□□□□ -0.72
PHC3-202ENST00000466189 SPDYE6P0CI01 402 aa10.56□□□□□ -0.72
PHC3-202ENST00000466189 SPDYE2Q495Y8 402 aa10.56□□□□□ -0.72
PHC3-202ENST00000466189 WDR62O43379 1518 aa10.56□□□□□ -0.72
PHC3-202ENST00000466189 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms