RNA–Protein interactions for RNA: ENST00000479986.1

HIST1H3J-202, Transcript of histone cluster 1 H3 family member j, humanhuman

TSL 2

Gene HIST1H3J, Length 522 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3J-202ENST00000479986 NISCHQ9Y2I1 1504 aa54.18■■■■■ 6.26
HIST1H3J-202ENST00000479986 CCDC180Q9P1Z9 1646 aa48.21■■■■■ 5.31
HIST1H3J-202ENST00000479986 ABCC9O60706 1549 aa47.77■■■■■ 5.24
HIST1H3J-202ENST00000479986 DCAF8L2P0C7V8 631 aa45.64■■■■■ 4.9
HIST1H3J-202ENST00000479986 RB1CC1Q8TDY2 1594 aa45.63■■■■■ 4.9
HIST1H3J-202ENST00000479986 NACADO15069 1562 aa45.45■■■■■ 4.87
HIST1H3J-202ENST00000479986 ZCCHC6Q5VYS8 1495 aaKnown RBP45.02■■■■■ 4.8
HIST1H3J-202ENST00000479986 MYO15BQ96JP2 1530 aa44.99■■■■■ 4.79
HIST1H3J-202ENST00000479986 DCAF1Q9Y4B6 1507 aa44.69■■■■■ 4.74
HIST1H3J-202ENST00000479986 PABPN1Q86U42 306 aaKnown RBP eCLIP44.66■■■■■ 4.74
HIST1H3J-202ENST00000479986 UNC13AQ9UPW8 1703 aa44.63■■■■■ 4.73
HIST1H3J-202ENST00000479986 BICRAQ9NZM4 1560 aa44.33■■■■■ 4.69
HIST1H3J-202ENST00000479986 DNAJC5BQ9UF47 199 aa44.29■■■■■ 4.68
HIST1H3J-202ENST00000479986 SCRIBQ14160 1630 aa44.13■■■■■ 4.66
HIST1H3J-202ENST00000479986 SHROOM4Q9ULL8 1493 aa43.64■■■■■ 4.58
HIST1H3J-202ENST00000479986 EIF4G1Q04637 1599 aaKnown RBP43.17■■■■■ 4.5
HIST1H3J-202ENST00000479986 CC2D2AQ9P2K1 1620 aa43.11■■■■■ 4.49
HIST1H3J-202ENST00000479986 CECR2Q9BXF3 1484 aa42.91■■■■■ 4.46
HIST1H3J-202ENST00000479986 SMARCA4P51532 1647 aa42.1■■■■■ 4.33
HIST1H3J-202ENST00000479986 ATAD2BQ9ULI0 1458 aa42■■■■■ 4.31
HIST1H3J-202ENST00000479986 NCAPD3P42695 1498 aa41.99■■■■■ 4.31
HIST1H3J-202ENST00000479986 BAZ1AQ9NRL2 1556 aaPredicted RBP41.97■■■■■ 4.31
HIST1H3J-202ENST00000479986 SMARCA2P51531 1590 aa41.86■■■■■ 4.29
HIST1H3J-202ENST00000479986 MROH2BQ7Z745 1585 aa41.81■■■■■ 4.28
HIST1H3J-202ENST00000479986 HMGXB3Q12766 1538 aa41.7■■■■■ 4.27
HIST1H3J-202ENST00000479986 BAZ1BQ9UIG0 1483 aaKnown RBP41.63■■■■■ 4.25
HIST1H3J-202ENST00000479986 PEG3Q9GZU2 1588 aa41.62■■■■■ 4.25
HIST1H3J-202ENST00000479986 WIZO95785 1651 aa41.33■■■■■ 4.21
HIST1H3J-202ENST00000479986 NESP48681 1621 aa41.24■■■■■ 4.19
HIST1H3J-202ENST00000479986 RSF1Q96T23 1441 aaPredicted RBP41.18■■■■■ 4.18
HIST1H3J-202ENST00000479986 ERCC6Q03468 1493 aa41.15■■■■■ 4.18
HIST1H3J-202ENST00000479986 LAMC3Q9Y6N6 1575 aa40.91■■■■■ 4.14
HIST1H3J-202ENST00000479986 TOP2AP11388 1531 aaKnown RBP40.8■■■■■ 4.12
HIST1H3J-202ENST00000479986 CADPSQ9ULU8 1353 aa40.79■■■■■ 4.12
HIST1H3J-202ENST00000479986 CUX2O14529 1486 aa40.76■■■■■ 4.12
HIST1H3J-202ENST00000479986 PDS5BQ9NTI5 1447 aa40.69■■■■■ 4.1
HIST1H3J-202ENST00000479986 KIF21AQ7Z4S6 1674 aa40.65■■■■■ 4.1
HIST1H3J-202ENST00000479986 THOC2Q8NI27 1593 aaKnown RBP40.57■■■■■ 4.09
HIST1H3J-202ENST00000479986 CFTRP13569 1480 aa40.44■■■■■ 4.06
HIST1H3J-202ENST00000479986 CCDC88BA6NC98 1476 aa40.39■■■■■ 4.06
HIST1H3J-202ENST00000479986 FANCD2Q9BXW9 1451 aa40.33■■■■■ 4.05
HIST1H3J-202ENST00000479986 MRC2Q9UBG0 1479 aa40.32■■■■■ 4.04
HIST1H3J-202ENST00000479986 CEP164Q9UPV0 1460 aa40.3■■■■■ 4.04
HIST1H3J-202ENST00000479986 WDR62O43379 1518 aa40.16■■■■■ 4.02
HIST1H3J-202ENST00000479986 DNAJC5Q9H3Z4 198 aa40.07■■■■■ 4.01
HIST1H3J-202ENST00000479986 SUPT5HO00267 1087 aaKnown RBP40.01■■■■■ 4
HIST1H3J-202ENST00000479986 PRDM2Q13029 1718 aa40.01■■■■■ 4
HIST1H3J-202ENST00000479986 URB2Q14146 1524 aaKnown RBP39.98■■■■□ 3.99
HIST1H3J-202ENST00000479986 TOPBP1Q92547 1522 aa39.65■■■■□ 3.94
HIST1H3J-202ENST00000479986 ABCC8Q09428 1581 aa39.52■■■■□ 3.92
HIST1H3J-202ENST00000479986 DNMBPQ6XZF7 1577 aa39.52■■■■□ 3.92
HIST1H3J-202ENST00000479986 IFT140Q96RY7 1462 aa39.45■■■■□ 3.91
HIST1H3J-202ENST00000479986 ZNF608Q9ULD9 1512 aaPredicted RBP39.41■■■■□ 3.9
HIST1H3J-202ENST00000479986 POLA1P09884 1462 aaPredicted RBP39.29■■■■□ 3.88
HIST1H3J-202ENST00000479986 CUX1P39880 1505 aa39.23■■■■□ 3.87
HIST1H3J-202ENST00000479986 TARBP1Q13395 1621 aaKnown RBP39.22■■■■□ 3.87
HIST1H3J-202ENST00000479986 RAD54L2Q9Y4B4 1467 aa39.2■■■■□ 3.87
HIST1H3J-202ENST00000479986 AQRO60306 1485 aaKnown RBP eCLIP39.15■■■■□ 3.86
HIST1H3J-202ENST00000479986 FGD5Q6ZNL6 1462 aa39.15■■■■□ 3.86
HIST1H3J-202ENST00000479986 EIF4G3O43432 1585 aaKnown RBP39.15■■■■□ 3.86
HIST1H3J-202ENST00000479986 SOGA1O94964 1423 aa39.14■■■■□ 3.86
HIST1H3J-202ENST00000479986 OSCARQ8IYS5 282 aa39.11■■■■□ 3.85
HIST1H3J-202ENST00000479986 TDRD9Q8NDG6 1382 aaKnown RBP39.04■■■■□ 3.84
HIST1H3J-202ENST00000479986 FBLN2P98095 1184 aa38.82■■■■□ 3.8
HIST1H3J-202ENST00000479986 WRNQ14191 1432 aaPredicted RBP eCLIP38.81■■■■□ 3.8
HIST1H3J-202ENST00000479986 WDR97A6NE52 1622 aa38.77■■■■□ 3.8
HIST1H3J-202ENST00000479986 SYNJ1O43426 1573 aa38.76■■■■□ 3.8
HIST1H3J-202ENST00000479986 CHD1O14646 1710 aa38.75■■■■□ 3.79
HIST1H3J-202ENST00000479986 SNAPC4Q5SXM2 1469 aa38.73■■■■□ 3.79
HIST1H3J-202ENST00000479986 TOP2BQ02880 1626 aa38.72■■■■□ 3.79
HIST1H3J-202ENST00000479986 TRIM41Q8WV44 630 aa38.72■■■■□ 3.79
HIST1H3J-202ENST00000479986 BIVM-ERCC5R4GMW8 1640 aa38.71■■■■□ 3.79
HIST1H3J-202ENST00000479986 ABCA10Q8WWZ4 1543 aa38.7■■■■□ 3.79
HIST1H3J-202ENST00000479986 GRIN2BQ13224 1484 aa38.68■■■■□ 3.78
HIST1H3J-202ENST00000479986 GAPVD1Q14C86 1478 aa38.66■■■■□ 3.78
HIST1H3J-202ENST00000479986 CHMP7Q8WUX9 453 aaPredicted RBP38.58■■■■□ 3.77
HIST1H3J-202ENST00000479986 MAGI1Q96QZ7 1491 aaPredicted RBP38.58■■■■□ 3.77
HIST1H3J-202ENST00000479986 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
HIST1H3J-202ENST00000479986 PBRM1Q86U86 1689 aa38.56■■■■□ 3.76
HIST1H3J-202ENST00000479986 RIMBP3CA6NJZ7 1639 aa38.5■■■■□ 3.75
HIST1H3J-202ENST00000479986 RIMBP3BA6NNM3 1639 aa38.5■■■■□ 3.75
HIST1H3J-202ENST00000479986 RIMBP3Q9UFD9 1639 aa38.5■■■■□ 3.75
HIST1H3J-202ENST00000479986 SYNJ2O15056 1496 aa38.47■■■■□ 3.75
HIST1H3J-202ENST00000479986 ARHGEF11O15085 1522 aa38.44■■■■□ 3.74
HIST1H3J-202ENST00000479986 CLASP1Q7Z460 1538 aa38.29■■■■□ 3.72
HIST1H3J-202ENST00000479986 ADAMTS12P58397 1594 aa38.24■■■■□ 3.71
HIST1H3J-202ENST00000479986 CYB5RLQ6IPT4 315 aa38.22■■■■□ 3.71
HIST1H3J-202ENST00000479986 ERICH3Q5RHP9 1530 aa38.19■■■■□ 3.7
HIST1H3J-202ENST00000479986 GRIN2AQ12879 1464 aa38.19■■■■□ 3.7
HIST1H3J-202ENST00000479986 FHAD1B1AJZ9 1412 aa38.18■■■■□ 3.7
HIST1H3J-202ENST00000479986 ARAP1Q96P48 1450 aa38.14■■■■□ 3.7
HIST1H3J-202ENST00000479986 CEP170Q5SW79 1584 aa38.05■■■■□ 3.68
HIST1H3J-202ENST00000479986 NUP160Q12769 1436 aa38.03■■■■□ 3.68
HIST1H3J-202ENST00000479986 KIF27Q86VH2 1401 aa38.01■■■■□ 3.68
HIST1H3J-202ENST00000479986 IGF1RP08069 1367 aa37.96■■■■□ 3.67
HIST1H3J-202ENST00000479986 ERCC6L2Q5T890 1561 aa37.85■■■■□ 3.65
HIST1H3J-202ENST00000479986 CUL7Q14999 1698 aa37.76■■■■□ 3.63
HIST1H3J-202ENST00000479986 SHROOM2Q13796 1616 aa37.74■■■■□ 3.63
HIST1H3J-202ENST00000479986 CARMIL1Q5VZK9 1371 aa37.72■■■■□ 3.63
HIST1H3J-202ENST00000479986 JPH4Q96JJ6 628 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms