RNA–Protein interactions for RNA: ENST00000484931.5

PHC3-210, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-210ENST00000484931 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
PHC3-210ENST00000484931 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
PHC3-210ENST00000484931 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
PHC3-210ENST00000484931 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
PHC3-210ENST00000484931 FOXD1Q16676 465 aa18.65■□□□□ 0.58
PHC3-210ENST00000484931 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
PHC3-210ENST00000484931 MSH5O43196 834 aa17.61■□□□□ 0.41
PHC3-210ENST00000484931 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
PHC3-210ENST00000484931 PLPPR3Q6T4P5 718 aa17.31■□□□□ 0.36
PHC3-210ENST00000484931 ADRA2BP18089 450 aa17.18■□□□□ 0.34
PHC3-210ENST00000484931 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
PHC3-210ENST00000484931 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
PHC3-210ENST00000484931 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
PHC3-210ENST00000484931 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
PHC3-210ENST00000484931 CACNB1Q02641 598 aaPredicted RBP15.45■□□□□ 0.06
PHC3-210ENST00000484931 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
PHC3-210ENST00000484931 PPP4R3CPQ6ZMV5 832 aa15.14■□□□□ 0.01
PHC3-210ENST00000484931 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
PHC3-210ENST00000484931 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
PHC3-210ENST00000484931 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
PHC3-210ENST00000484931 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
PHC3-210ENST00000484931 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
PHC3-210ENST00000484931 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
PHC3-210ENST00000484931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.5□□□□□ -0.091e-6■■□□□ 11.4
PHC3-210ENST00000484931 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
PHC3-210ENST00000484931 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
PHC3-210ENST00000484931 CAPN15O75808 1086 aa14.07□□□□□ -0.16
PHC3-210ENST00000484931 U3KPZ7 1027 aaPredicted RBP14.01□□□□□ -0.17
PHC3-210ENST00000484931 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
PHC3-210ENST00000484931 DSG3P32926 999 aa13.91□□□□□ -0.18
PHC3-210ENST00000484931 POTEHQ6S545 545 aa13.91□□□□□ -0.18
PHC3-210ENST00000484931 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
PHC3-210ENST00000484931 ABCB7O75027 752 aa13.71□□□□□ -0.21
PHC3-210ENST00000484931 KCNA4P22459 653 aa13.68□□□□□ -0.22
PHC3-210ENST00000484931 APLP2Q06481 763 aa13.66□□□□□ -0.22
PHC3-210ENST00000484931 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
PHC3-210ENST00000484931 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
PHC3-210ENST00000484931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
PHC3-210ENST00000484931 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
PHC3-210ENST00000484931 SAMD1Q6SPF0 538 aaPredicted RBP13.45□□□□□ -0.26
PHC3-210ENST00000484931 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
PHC3-210ENST00000484931 POLA2Q14181 598 aa13.25□□□□□ -0.29
PHC3-210ENST00000484931 CHRDL2Q6WN34 429 aa13.18□□□□□ -0.3
PHC3-210ENST00000484931 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
PHC3-210ENST00000484931 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
PHC3-210ENST00000484931 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
PHC3-210ENST00000484931 ZBTB12Q9Y330 459 aaPredicted RBP12.9□□□□□ -0.34
PHC3-210ENST00000484931 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
PHC3-210ENST00000484931 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
PHC3-210ENST00000484931 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
PHC3-210ENST00000484931 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
PHC3-210ENST00000484931 REM2Q8IYK8 340 aaPredicted RBP12.82□□□□□ -0.36
PHC3-210ENST00000484931 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
PHC3-210ENST00000484931 HAX1O00165 279 aa12.76□□□□□ -0.37
PHC3-210ENST00000484931 PITPNM1O00562 1244 aa12.69□□□□□ -0.38
PHC3-210ENST00000484931 FXR2P51116 673 aaKnown RBP eCLIP12.58□□□□□ -0.4
PHC3-210ENST00000484931 FBLN2P98095 1184 aa12.51□□□□□ -0.41
PHC3-210ENST00000484931 ZBTB22O15209 634 aa12.5□□□□□ -0.41
PHC3-210ENST00000484931 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
PHC3-210ENST00000484931 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
PHC3-210ENST00000484931 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
PHC3-210ENST00000484931 EVX2Q03828 476 aa12.45□□□□□ -0.42
PHC3-210ENST00000484931 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
PHC3-210ENST00000484931 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
PHC3-210ENST00000484931 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
PHC3-210ENST00000484931 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
PHC3-210ENST00000484931 ZNF692Q9BU19 519 aaPredicted RBP12.35□□□□□ -0.43
PHC3-210ENST00000484931 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
PHC3-210ENST00000484931 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
PHC3-210ENST00000484931 C19orf67A6NJJ6 358 aa12.2□□□□□ -0.46
PHC3-210ENST00000484931 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
PHC3-210ENST00000484931 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
PHC3-210ENST00000484931 GABBR2O75899 941 aa12.17□□□□□ -0.46
PHC3-210ENST00000484931 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
PHC3-210ENST00000484931 LHX8Q68G74 356 aa12.09□□□□□ -0.47
PHC3-210ENST00000484931 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
PHC3-210ENST00000484931 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
PHC3-210ENST00000484931 DCBLD2Q96PD2 775 aa11.88□□□□□ -0.51
PHC3-210ENST00000484931 POTEIP0CG38 1075 aa11.85□□□□□ -0.51
PHC3-210ENST00000484931 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
PHC3-210ENST00000484931 CLCN6P51797 869 aa11.77□□□□□ -0.53
PHC3-210ENST00000484931 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
PHC3-210ENST00000484931 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
PHC3-210ENST00000484931 STAG3Q9UJ98 1225 aa11.69□□□□□ -0.54
PHC3-210ENST00000484931 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
PHC3-210ENST00000484931 PAK3O75914 559 aaPredicted RBP11.67□□□□□ -0.54
PHC3-210ENST00000484931 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
PHC3-210ENST00000484931 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
PHC3-210ENST00000484931 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
PHC3-210ENST00000484931 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
PHC3-210ENST00000484931 NPM1P06748 294 aaKnown RBP eCLIP11.54□□□□□ -0.56
PHC3-210ENST00000484931 OTUD5Q96G74 571 aa11.51□□□□□ -0.57
PHC3-210ENST00000484931 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
PHC3-210ENST00000484931 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
PHC3-210ENST00000484931 POTEMA6NI47 508 aa11.42□□□□□ -0.58
PHC3-210ENST00000484931 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
PHC3-210ENST00000484931 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
PHC3-210ENST00000484931 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
PHC3-210ENST00000484931 METRNQ9UJH8 293 aa11.39□□□□□ -0.59
PHC3-210ENST00000484931 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms