Protein–RNA interactions for Protein: P08237

PFKM, ATP-dependent 6-phosphofructokinase, muscle type, humanhuman

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFKMP08237 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.37■■■□□ 2.77
PFKMP08237 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.36■■■□□ 2.77
PFKMP08237 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.36■■■□□ 2.77
PFKMP08237 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.36■■■□□ 2.77
PFKMP08237 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.35■■■□□ 2.77
PFKMP08237 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
PFKMP08237 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PFKMP08237 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.28■■■□□ 2.76
PFKMP08237 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PFKMP08237 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
PFKMP08237 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PFKMP08237 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.23■■■□□ 2.75
PFKMP08237 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.23■■■□□ 2.75
PFKMP08237 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.23■■■□□ 2.75
PFKMP08237 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.22■■■□□ 2.75
PFKMP08237 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
PFKMP08237 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.2■■■□□ 2.75
PFKMP08237 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PFKMP08237 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.16■■■□□ 2.74
PFKMP08237 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
PFKMP08237 RARRES2P7-201ENST00000567349 469 ntBASIC32.15■■■□□ 2.74
PFKMP08237 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PFKMP08237 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PFKMP08237 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.07■■■□□ 2.72
PFKMP08237 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.05■■■□□ 2.72
PFKMP08237 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.04■■■□□ 2.72
PFKMP08237 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PFKMP08237 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.94■■■□□ 2.7
PFKMP08237 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.92■■■□□ 2.7
PFKMP08237 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.92■■■□□ 2.7
PFKMP08237 AC097358.2-201ENST00000607541 1159 ntBASIC31.91■■■□□ 2.7
PFKMP08237 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
PFKMP08237 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PFKMP08237 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PFKMP08237 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PFKMP08237 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PFKMP08237 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.86■■■□□ 2.69
PFKMP08237 SETD8P1-201ENST00000623146 1180 ntBASIC31.8■■■□□ 2.68
PFKMP08237 AC136428.2-201ENST00000563187 214 ntBASIC31.79■■■□□ 2.68
PFKMP08237 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
PFKMP08237 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.74■■■□□ 2.67
PFKMP08237 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.74■■■□□ 2.67
PFKMP08237 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PFKMP08237 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PFKMP08237 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.69■■■□□ 2.66
PFKMP08237 SUZ12P1-203ENST00000578195 985 ntBASIC31.69■■■□□ 2.66
PFKMP08237 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
PFKMP08237 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PFKMP08237 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PFKMP08237 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.63■■■□□ 2.65
PFKMP08237 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PFKMP08237 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PFKMP08237 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PFKMP08237 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.59■■■□□ 2.65
PFKMP08237 RPS2P35-201ENST00000443417 897 ntBASIC31.58■■■□□ 2.65
PFKMP08237 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PFKMP08237 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PFKMP08237 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PFKMP08237 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.53■■■□□ 2.64
PFKMP08237 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PFKMP08237 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.51■■■□□ 2.63
PFKMP08237 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.5■■■□□ 2.63
PFKMP08237 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.5■■■□□ 2.63
PFKMP08237 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.5■■■□□ 2.63
PFKMP08237 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
PFKMP08237 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
PFKMP08237 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PFKMP08237 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
PFKMP08237 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PFKMP08237 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.46■■■□□ 2.63
PFKMP08237 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PFKMP08237 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
PFKMP08237 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PFKMP08237 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.32■■■□□ 2.6
PFKMP08237 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PFKMP08237 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
PFKMP08237 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PFKMP08237 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PFKMP08237 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.27■■■□□ 2.6
PFKMP08237 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PFKMP08237 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PFKMP08237 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PFKMP08237 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
PFKMP08237 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.21■■■□□ 2.59
PFKMP08237 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
PFKMP08237 AP006261.1-201ENST00000584783 668 ntBASIC31.21■■■□□ 2.59
PFKMP08237 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
PFKMP08237 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
PFKMP08237 CAHM-201ENST00000604200 896 ntBASIC31.2■■■□□ 2.59
PFKMP08237 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.18■■■□□ 2.58
PFKMP08237 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PFKMP08237 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PFKMP08237 AL162393.1-201ENST00000437852 946 ntBASIC31.16■■■□□ 2.58
PFKMP08237 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PFKMP08237 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PFKMP08237 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.1■■■□□ 2.57
PFKMP08237 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.09■■■□□ 2.57
PFKMP08237 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PFKMP08237 AL391121.1-201ENST00000607967 1349 ntBASIC31.08■■■□□ 2.57
PFKMP08237 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms