Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
COL5A2P05997 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC39.66■■■■□ 3.94
COL5A2P05997 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC39.63■■■■□ 3.93
COL5A2P05997 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC39.62■■■■□ 3.93
COL5A2P05997 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC39.62■■■■□ 3.93
COL5A2P05997 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC39.62■■■■□ 3.93
COL5A2P05997 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC39.61■■■■□ 3.93
COL5A2P05997 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC39.59■■■■□ 3.93
COL5A2P05997 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC39.58■■■■□ 3.93
COL5A2P05997 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC39.54■■■■□ 3.92
COL5A2P05997 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC39.53■■■■□ 3.92
COL5A2P05997 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC39.53■■■■□ 3.92
COL5A2P05997 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC39.53■■■■□ 3.92
COL5A2P05997 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC39.51■■■■□ 3.92
COL5A2P05997 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC39.46■■■■□ 3.91
COL5A2P05997 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
COL5A2P05997 RARRES2P7-201ENST00000567349 469 ntBASIC39.39■■■■□ 3.9
COL5A2P05997 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC39.38■■■■□ 3.9
COL5A2P05997 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC39.38■■■■□ 3.9
COL5A2P05997 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC39.34■■■■□ 3.89
COL5A2P05997 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC39.32■■■■□ 3.89
COL5A2P05997 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
COL5A2P05997 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
COL5A2P05997 AC136428.2-201ENST00000563187 214 ntBASIC39.19■■■■□ 3.86
COL5A2P05997 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC39.19■■■■□ 3.86
COL5A2P05997 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC39.13■■■■□ 3.85
COL5A2P05997 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
COL5A2P05997 AC097358.2-201ENST00000607541 1159 ntBASIC39.1■■■■□ 3.85
COL5A2P05997 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC39.08■■■■□ 3.85
COL5A2P05997 EBPL-203ENST00000378270 579 ntTSL 2 BASIC39.08■■■■□ 3.85
COL5A2P05997 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC39.07■■■■□ 3.85
COL5A2P05997 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC39.05■■■■□ 3.84
COL5A2P05997 SUZ12P1-203ENST00000578195 985 ntBASIC39.04■■■■□ 3.84
COL5A2P05997 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
COL5A2P05997 SETD8P1-201ENST00000623146 1180 ntBASIC39.03■■■■□ 3.84
COL5A2P05997 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC39.01■■■■□ 3.84
COL5A2P05997 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
COL5A2P05997 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
COL5A2P05997 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC38.92■■■■□ 3.82
COL5A2P05997 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
COL5A2P05997 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
COL5A2P05997 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC38.88■■■■□ 3.81
COL5A2P05997 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC38.86■■■■□ 3.81
COL5A2P05997 KLF16-203ENST00000592313 508 ntTSL 3 BASIC38.86■■■■□ 3.81
COL5A2P05997 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
COL5A2P05997 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC38.81■■■■□ 3.8
COL5A2P05997 RPS2P35-201ENST00000443417 897 ntBASIC38.79■■■■□ 3.8
COL5A2P05997 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC38.79■■■■□ 3.8
COL5A2P05997 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC38.79■■■■□ 3.8
COL5A2P05997 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC38.78■■■■□ 3.8
COL5A2P05997 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC38.75■■■■□ 3.79
COL5A2P05997 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC38.74■■■■□ 3.79
COL5A2P05997 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
COL5A2P05997 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC38.73■■■■□ 3.79
COL5A2P05997 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
COL5A2P05997 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC38.67■■■■□ 3.78
COL5A2P05997 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC38.66■■■■□ 3.78
COL5A2P05997 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC38.66■■■■□ 3.78
COL5A2P05997 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC38.59■■■■□ 3.77
COL5A2P05997 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
COL5A2P05997 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.58■■■■□ 3.77
COL5A2P05997 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC38.55■■■■□ 3.76
COL5A2P05997 ILK-212ENST00000532063 1617 ntTSL 2 BASIC38.51■■■■□ 3.76
COL5A2P05997 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
COL5A2P05997 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
COL5A2P05997 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.39■■■■□ 3.74
COL5A2P05997 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
COL5A2P05997 AL162393.1-201ENST00000437852 946 ntBASIC38.37■■■■□ 3.73
COL5A2P05997 CAHM-201ENST00000604200 896 ntBASIC38.37■■■■□ 3.73
COL5A2P05997 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC38.37■■■■□ 3.73
COL5A2P05997 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
COL5A2P05997 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC38.36■■■■□ 3.73
COL5A2P05997 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC38.35■■■■□ 3.73
COL5A2P05997 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
COL5A2P05997 AC145285.7-201ENST00000614819 1539 ntBASIC38.3■■■■□ 3.72
COL5A2P05997 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC38.28■■■■□ 3.72
COL5A2P05997 NRG1-221ENST00000614767 762 ntTSL 5 BASIC38.28■■■■□ 3.72
COL5A2P05997 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
COL5A2P05997 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
COL5A2P05997 MVK-208ENST00000539696 608 ntTSL 5 BASIC38.24■■■■□ 3.71
COL5A2P05997 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
COL5A2P05997 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC38.18■■■■□ 3.7
COL5A2P05997 AL391121.1-201ENST00000607967 1349 ntBASIC38.18■■■■□ 3.7
COL5A2P05997 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
COL5A2P05997 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
COL5A2P05997 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
COL5A2P05997 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
COL5A2P05997 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC38.15■■■■□ 3.7
COL5A2P05997 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
COL5A2P05997 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC38.14■■■■□ 3.7
COL5A2P05997 AP006261.1-201ENST00000584783 668 ntBASIC38.14■■■■□ 3.7
COL5A2P05997 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.13■■■■□ 3.69
COL5A2P05997 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
COL5A2P05997 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
COL5A2P05997 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC38.08■■■■□ 3.69
COL5A2P05997 AL133380.1-201ENST00000506013 324 ntBASIC38.07■■■■□ 3.68
COL5A2P05997 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
COL5A2P05997 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
COL5A2P05997 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
COL5A2P05997 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms