Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RTL8CO15255 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.69■□□□□ 0.74
RTL8CO15255 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
RTL8CO15255 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.67■□□□□ 0.74
RTL8CO15255 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RTL8CO15255 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RTL8CO15255 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL8CO15255 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL8CO15255 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.65■□□□□ 0.74
RTL8CO15255 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RTL8CO15255 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL8CO15255 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL8CO15255 RARRES2P7-201ENST00000567349 469 ntBASIC19.6■□□□□ 0.73
RTL8CO15255 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL8CO15255 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RTL8CO15255 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.6■□□□□ 0.73
RTL8CO15255 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RTL8CO15255 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC19.58■□□□□ 0.73
RTL8CO15255 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.58■□□□□ 0.72
RTL8CO15255 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.58■□□□□ 0.72
RTL8CO15255 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RTL8CO15255 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTL8CO15255 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTL8CO15255 AC097358.2-201ENST00000607541 1159 ntBASIC19.47■□□□□ 0.71
RTL8CO15255 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTL8CO15255 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RTL8CO15255 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL8CO15255 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.43■□□□□ 0.7
RTL8CO15255 AC136428.2-201ENST00000563187 214 ntBASIC19.41■□□□□ 0.7
RTL8CO15255 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.41■□□□□ 0.7
RTL8CO15255 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTL8CO15255 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.4■□□□□ 0.7
RTL8CO15255 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8CO15255 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8CO15255 SETD8P1-201ENST00000623146 1180 ntBASIC19.39■□□□□ 0.69
RTL8CO15255 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8CO15255 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL8CO15255 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.35■□□□□ 0.69
RTL8CO15255 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RTL8CO15255 SUZ12P1-203ENST00000578195 985 ntBASIC19.34■□□□□ 0.69
RTL8CO15255 RPS2P35-201ENST00000443417 897 ntBASIC19.33■□□□□ 0.68
RTL8CO15255 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.31■□□□□ 0.68
RTL8CO15255 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTL8CO15255 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL8CO15255 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.29■□□□□ 0.68
RTL8CO15255 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTL8CO15255 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RTL8CO15255 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTL8CO15255 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.26■□□□□ 0.67
RTL8CO15255 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.26■□□□□ 0.67
RTL8CO15255 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RTL8CO15255 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RTL8CO15255 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTL8CO15255 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RTL8CO15255 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL8CO15255 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTL8CO15255 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTL8CO15255 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.21■□□□□ 0.67
RTL8CO15255 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTL8CO15255 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.19■□□□□ 0.66
RTL8CO15255 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.19■□□□□ 0.66
RTL8CO15255 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.16■□□□□ 0.66
RTL8CO15255 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTL8CO15255 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL8CO15255 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTL8CO15255 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RTL8CO15255 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RTL8CO15255 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RTL8CO15255 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.07■□□□□ 0.64
RTL8CO15255 CAHM-201ENST00000604200 896 ntBASIC19.05■□□□□ 0.64
RTL8CO15255 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL8CO15255 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL8CO15255 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RTL8CO15255 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL8CO15255 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTL8CO15255 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RTL8CO15255 AL162393.1-201ENST00000437852 946 ntBASIC19.02■□□□□ 0.64
RTL8CO15255 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.02■□□□□ 0.64
RTL8CO15255 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.01■□□□□ 0.63
RTL8CO15255 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RTL8CO15255 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.99■□□□□ 0.63
RTL8CO15255 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.98■□□□□ 0.63
RTL8CO15255 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.97■□□□□ 0.63
RTL8CO15255 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.97■□□□□ 0.63
RTL8CO15255 AC145285.7-201ENST00000614819 1539 ntBASIC18.96■□□□□ 0.63
RTL8CO15255 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL8CO15255 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RTL8CO15255 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTL8CO15255 AP006261.1-201ENST00000584783 668 ntBASIC18.95■□□□□ 0.62
RTL8CO15255 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.94■□□□□ 0.62
RTL8CO15255 AL391121.1-201ENST00000607967 1349 ntBASIC18.94■□□□□ 0.62
RTL8CO15255 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTL8CO15255 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTL8CO15255 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RTL8CO15255 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.9■□□□□ 0.62
RTL8CO15255 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RTL8CO15255 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL8CO15255 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.89■□□□□ 0.61
RTL8CO15255 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RTL8CO15255 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms