Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
TBC1D3FA6NER0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
TBC1D3FA6NER0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
TBC1D3FA6NER0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
TBC1D3FA6NER0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.1■■■□□ 2.25
TBC1D3FA6NER0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
TBC1D3FA6NER0 AL031258.1-201ENST00000623562 325 ntBASIC29.08■■■□□ 2.25
TBC1D3FA6NER0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
TBC1D3FA6NER0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D3FA6NER0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
TBC1D3FA6NER0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.03■■■□□ 2.24
TBC1D3FA6NER0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
TBC1D3FA6NER0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.96■■■□□ 2.23
TBC1D3FA6NER0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TBC1D3FA6NER0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
TBC1D3FA6NER0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.89■■■□□ 2.22
TBC1D3FA6NER0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
TBC1D3FA6NER0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.88■■■□□ 2.21
TBC1D3FA6NER0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.88■■■□□ 2.21
TBC1D3FA6NER0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
TBC1D3FA6NER0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
TBC1D3FA6NER0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.83■■■□□ 2.21
TBC1D3FA6NER0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TBC1D3FA6NER0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.75■■■□□ 2.19
TBC1D3FA6NER0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
TBC1D3FA6NER0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
TBC1D3FA6NER0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.73■■■□□ 2.19
TBC1D3FA6NER0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.72■■■□□ 2.19
TBC1D3FA6NER0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TBC1D3FA6NER0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TBC1D3FA6NER0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.69■■■□□ 2.18
TBC1D3FA6NER0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.68■■■□□ 2.18
TBC1D3FA6NER0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TBC1D3FA6NER0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TBC1D3FA6NER0 AC145285.7-201ENST00000614819 1539 ntBASIC28.62■■■□□ 2.17
TBC1D3FA6NER0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.62■■■□□ 2.17
TBC1D3FA6NER0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TBC1D3FA6NER0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC28.6■■■□□ 2.17
TBC1D3FA6NER0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.6■■■□□ 2.17
TBC1D3FA6NER0 RARRES2P7-201ENST00000567349 469 ntBASIC28.6■■■□□ 2.17
TBC1D3FA6NER0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
TBC1D3FA6NER0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.56■■■□□ 2.16
TBC1D3FA6NER0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TBC1D3FA6NER0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TBC1D3FA6NER0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.52■■■□□ 2.16
TBC1D3FA6NER0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
TBC1D3FA6NER0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
TBC1D3FA6NER0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
TBC1D3FA6NER0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
TBC1D3FA6NER0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
TBC1D3FA6NER0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TBC1D3FA6NER0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TBC1D3FA6NER0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.46■■■□□ 2.15
TBC1D3FA6NER0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.44■■■□□ 2.14
TBC1D3FA6NER0 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.44■■■□□ 2.14
TBC1D3FA6NER0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.43■■■□□ 2.14
TBC1D3FA6NER0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.42■■■□□ 2.14
TBC1D3FA6NER0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TBC1D3FA6NER0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.41■■■□□ 2.14
TBC1D3FA6NER0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
TBC1D3FA6NER0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TBC1D3FA6NER0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.36■■■□□ 2.13
TBC1D3FA6NER0 SETD8P1-201ENST00000623146 1180 ntBASIC28.35■■■□□ 2.13
TBC1D3FA6NER0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.34■■■□□ 2.13
TBC1D3FA6NER0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.34■■■□□ 2.13
TBC1D3FA6NER0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TBC1D3FA6NER0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.33■■■□□ 2.13
TBC1D3FA6NER0 AC097358.2-201ENST00000607541 1159 ntBASIC28.33■■■□□ 2.13
TBC1D3FA6NER0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.32■■■□□ 2.12
TBC1D3FA6NER0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TBC1D3FA6NER0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TBC1D3FA6NER0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
TBC1D3FA6NER0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TBC1D3FA6NER0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TBC1D3FA6NER0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TBC1D3FA6NER0 AC136428.2-201ENST00000563187 214 ntBASIC28.21■■■□□ 2.11
TBC1D3FA6NER0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.21■■■□□ 2.11
TBC1D3FA6NER0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TBC1D3FA6NER0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TBC1D3FA6NER0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.17■■■□□ 2.1
TBC1D3FA6NER0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
TBC1D3FA6NER0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.16■■■□□ 2.1
TBC1D3FA6NER0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
TBC1D3FA6NER0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.14■■■□□ 2.1
TBC1D3FA6NER0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
TBC1D3FA6NER0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TBC1D3FA6NER0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TBC1D3FA6NER0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.11■■■□□ 2.09
TBC1D3FA6NER0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
TBC1D3FA6NER0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TBC1D3FA6NER0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.1■■■□□ 2.09
TBC1D3FA6NER0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TBC1D3FA6NER0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TBC1D3FA6NER0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TBC1D3FA6NER0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.09■■■□□ 2.09
TBC1D3FA6NER0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TBC1D3FA6NER0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
TBC1D3FA6NER0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TBC1D3FA6NER0 SUZ12P1-203ENST00000578195 985 ntBASIC28.01■■■□□ 2.07
TBC1D3FA6NER0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms