Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC40.56■■■■■ 4.08
SBNO1A3KN83 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC40.56■■■■■ 4.08
SBNO1A3KN83 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC40.54■■■■■ 4.08
SBNO1A3KN83 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
SBNO1A3KN83 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC40.52■■■■■ 4.08
SBNO1A3KN83 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC40.52■■■■■ 4.08
SBNO1A3KN83 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
SBNO1A3KN83 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC40.48■■■■■ 4.07
SBNO1A3KN83 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC40.48■■■■■ 4.07
SBNO1A3KN83 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC40.46■■■■■ 4.07
SBNO1A3KN83 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC40.45■■■■■ 4.07
SBNO1A3KN83 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC40.45■■■■■ 4.07
SBNO1A3KN83 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC40.43■■■■■ 4.06
SBNO1A3KN83 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC40.41■■■■■ 4.06
SBNO1A3KN83 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC40.39■■■■■ 4.06
SBNO1A3KN83 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
SBNO1A3KN83 RARRES2P7-201ENST00000567349 469 ntBASIC40.32■■■■■ 4.04
SBNO1A3KN83 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC40.31■■■■■ 4.04
SBNO1A3KN83 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC40.3■■■■■ 4.04
SBNO1A3KN83 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC40.3■■■■■ 4.04
SBNO1A3KN83 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC40.27■■■■■ 4.04
SBNO1A3KN83 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC40.27■■■■■ 4.04
SBNO1A3KN83 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC40.18■■■■■ 4.02
SBNO1A3KN83 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC40.06■■■■■ 4
SBNO1A3KN83 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC40.06■■■■■ 4
SBNO1A3KN83 AC136428.2-201ENST00000563187 214 ntBASIC40.06■■■■■ 4
SBNO1A3KN83 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC40.05■■■■■ 4
SBNO1A3KN83 EBPL-203ENST00000378270 579 ntTSL 2 BASIC40.04■■■■■ 4
SBNO1A3KN83 AC097358.2-201ENST00000607541 1159 ntBASIC40.04■■■■■ 4
SBNO1A3KN83 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC40.02■■■■■ 4
SBNO1A3KN83 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC40■■■■□ 3.99
SBNO1A3KN83 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC40■■■■□ 3.99
SBNO1A3KN83 SUZ12P1-203ENST00000578195 985 ntBASIC39.93■■■■□ 3.98
SBNO1A3KN83 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC39.93■■■■□ 3.98
SBNO1A3KN83 SETD8P1-201ENST00000623146 1180 ntBASIC39.93■■■■□ 3.98
SBNO1A3KN83 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC39.9■■■■□ 3.98
SBNO1A3KN83 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC39.87■■■■□ 3.97
SBNO1A3KN83 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC39.87■■■■□ 3.97
SBNO1A3KN83 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
SBNO1A3KN83 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
SBNO1A3KN83 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC39.83■■■■□ 3.97
SBNO1A3KN83 KLF16-203ENST00000592313 508 ntTSL 3 BASIC39.8■■■■□ 3.96
SBNO1A3KN83 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC39.78■■■■□ 3.96
SBNO1A3KN83 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC39.75■■■■□ 3.95
SBNO1A3KN83 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
SBNO1A3KN83 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC39.72■■■■□ 3.95
SBNO1A3KN83 RPS2P35-201ENST00000443417 897 ntBASIC39.71■■■■□ 3.95
SBNO1A3KN83 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.7■■■■□ 3.95
SBNO1A3KN83 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC39.7■■■■□ 3.95
SBNO1A3KN83 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
SBNO1A3KN83 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC39.66■■■■□ 3.94
SBNO1A3KN83 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC39.63■■■■□ 3.93
SBNO1A3KN83 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
SBNO1A3KN83 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC39.61■■■■□ 3.93
SBNO1A3KN83 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC39.59■■■■□ 3.93
SBNO1A3KN83 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
SBNO1A3KN83 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC39.57■■■■□ 3.92
SBNO1A3KN83 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC39.54■■■■□ 3.92
SBNO1A3KN83 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC39.5■■■■□ 3.91
SBNO1A3KN83 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC39.48■■■■□ 3.91
SBNO1A3KN83 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
SBNO1A3KN83 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
SBNO1A3KN83 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
SBNO1A3KN83 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.38■■■■□ 3.89
SBNO1A3KN83 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.34■■■■□ 3.89
SBNO1A3KN83 CAHM-201ENST00000604200 896 ntBASIC39.28■■■■□ 3.88
SBNO1A3KN83 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC39.27■■■■□ 3.88
SBNO1A3KN83 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
SBNO1A3KN83 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
SBNO1A3KN83 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC39.26■■■■□ 3.88
SBNO1A3KN83 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
SBNO1A3KN83 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
SBNO1A3KN83 AL162393.1-201ENST00000437852 946 ntBASIC39.22■■■■□ 3.87
SBNO1A3KN83 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
SBNO1A3KN83 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC39.2■■■■□ 3.87
SBNO1A3KN83 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
SBNO1A3KN83 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC39.16■■■■□ 3.86
SBNO1A3KN83 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC39.16■■■■□ 3.86
SBNO1A3KN83 NRG1-221ENST00000614767 762 ntTSL 5 BASIC39.16■■■■□ 3.86
SBNO1A3KN83 MVK-208ENST00000539696 608 ntTSL 5 BASIC39.14■■■■□ 3.86
SBNO1A3KN83 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
SBNO1A3KN83 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC39.12■■■■□ 3.85
SBNO1A3KN83 AP006261.1-201ENST00000584783 668 ntBASIC39.1■■■■□ 3.85
SBNO1A3KN83 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC39.1■■■■□ 3.85
SBNO1A3KN83 AC145285.7-201ENST00000614819 1539 ntBASIC39.1■■■■□ 3.85
SBNO1A3KN83 AL391121.1-201ENST00000607967 1349 ntBASIC39.06■■■■□ 3.84
SBNO1A3KN83 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
SBNO1A3KN83 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC39.06■■■■□ 3.84
SBNO1A3KN83 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
SBNO1A3KN83 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
SBNO1A3KN83 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC39.03■■■■□ 3.84
SBNO1A3KN83 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC39.03■■■■□ 3.84
SBNO1A3KN83 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
SBNO1A3KN83 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
SBNO1A3KN83 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
SBNO1A3KN83 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
SBNO1A3KN83 AL133380.1-201ENST00000506013 324 ntBASIC38.93■■■■□ 3.82
SBNO1A3KN83 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SBNO1A3KN83 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
SBNO1A3KN83 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC38.89■■■■□ 3.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms