Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
BLOC1S4Q9NUP1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
BLOC1S4Q9NUP1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
BLOC1S4Q9NUP1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BLOC1S4Q9NUP1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 KRT18P10-201ENST00000388836 1287 ntBASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 MIR6765-201ENST00000614092 87 ntBASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
BLOC1S4Q9NUP1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 RPS2P7-201ENST00000447334 885 ntBASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BLOC1S4Q9NUP1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BLOC1S4Q9NUP1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BLOC1S4Q9NUP1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.52■■□□□ 1.84
BLOC1S4Q9NUP1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
BLOC1S4Q9NUP1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
BLOC1S4Q9NUP1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BLOC1S4Q9NUP1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
BLOC1S4Q9NUP1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.51■■□□□ 1.83
BLOC1S4Q9NUP1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
BLOC1S4Q9NUP1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
BLOC1S4Q9NUP1 AC142381.3-201ENST00000568208 1670 ntBASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BLOC1S4Q9NUP1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 AC138932.3-201ENST00000567634 1902 ntBASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 AC087393.1-201ENST00000582896 145 ntBASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BLOC1S4Q9NUP1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
BLOC1S4Q9NUP1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
BLOC1S4Q9NUP1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
BLOC1S4Q9NUP1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BLOC1S4Q9NUP1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
BLOC1S4Q9NUP1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.47■■□□□ 1.83
BLOC1S4Q9NUP1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 AC004987.1-201ENST00000428627 508 ntBASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
BLOC1S4Q9NUP1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
BLOC1S4Q9NUP1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 DUX4L18-201ENST00000553347 1267 ntBASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
BLOC1S4Q9NUP1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BLOC1S4Q9NUP1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BLOC1S4Q9NUP1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
BLOC1S4Q9NUP1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
BLOC1S4Q9NUP1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 ATP5G2P3-201ENST00000429083 425 ntBASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
BLOC1S4Q9NUP1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
BLOC1S4Q9NUP1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
BLOC1S4Q9NUP1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
BLOC1S4Q9NUP1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
BLOC1S4Q9NUP1 FOXO3B-201ENST00000395675 1928 ntBASIC26.41■■□□□ 1.82
BLOC1S4Q9NUP1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.4■■□□□ 1.82
BLOC1S4Q9NUP1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms