RNA–Protein interactions for RNA: ENST00000367616.4

NPHS2-202, Transcript of NPHS2, podocin, humanhuman

TSL 1 (best) BASIC

Gene NPHS2, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS2-202ENST00000367616 NISCHQ9Y2I1 1504 aa54.78■■■■■ 6.36
NPHS2-202ENST00000367616 CCDC180Q9P1Z9 1646 aa48.11■■■■■ 5.29
NPHS2-202ENST00000367616 ABCC9O60706 1549 aa47.09■■■■■ 5.13
NPHS2-202ENST00000367616 ZCCHC6Q5VYS8 1495 aaKnown RBP45.93■■■■■ 4.94
NPHS2-202ENST00000367616 DCAF1Q9Y4B6 1507 aa45.31■■■■■ 4.84
NPHS2-202ENST00000367616 DCAF8L2P0C7V8 631 aa45.31■■■■■ 4.84
NPHS2-202ENST00000367616 RB1CC1Q8TDY2 1594 aa45.25■■■■■ 4.83
NPHS2-202ENST00000367616 NACADO15069 1562 aa45.16■■■■■ 4.82
NPHS2-202ENST00000367616 MYO15BQ96JP2 1530 aa44.98■■■■■ 4.79
NPHS2-202ENST00000367616 SHROOM4Q9ULL8 1493 aa44.27■■■■■ 4.68
NPHS2-202ENST00000367616 UNC13AQ9UPW8 1703 aa44.26■■■■■ 4.68
NPHS2-202ENST00000367616 SCRIBQ14160 1630 aa44.12■■■■■ 4.65
NPHS2-202ENST00000367616 PABPN1Q86U42 306 aaKnown RBP eCLIP43.95■■■■■ 4.63
NPHS2-202ENST00000367616 BICRAQ9NZM4 1560 aa43.89■■■■■ 4.62
NPHS2-202ENST00000367616 DNAJC5BQ9UF47 199 aa43.26■■■■■ 4.52
NPHS2-202ENST00000367616 EIF4G1Q04637 1599 aaKnown RBP42.75■■■■■ 4.43
NPHS2-202ENST00000367616 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
NPHS2-202ENST00000367616 CECR2Q9BXF3 1484 aa42.58■■■■■ 4.41
NPHS2-202ENST00000367616 BAZ1AQ9NRL2 1556 aaPredicted RBP42.37■■■■■ 4.37
NPHS2-202ENST00000367616 SUPT5HO00267 1087 aaKnown RBP42.31■■■■■ 4.36
NPHS2-202ENST00000367616 MROH2BQ7Z745 1585 aa42.3■■■■■ 4.36
NPHS2-202ENST00000367616 SMARCA4P51532 1647 aa42.27■■■■■ 4.36
NPHS2-202ENST00000367616 RSF1Q96T23 1441 aaPredicted RBP42.25■■■■■ 4.35
NPHS2-202ENST00000367616 WIZO95785 1651 aa41.97■■■■■ 4.31
NPHS2-202ENST00000367616 PEG3Q9GZU2 1588 aa41.76■■■■■ 4.28
NPHS2-202ENST00000367616 ATAD2BQ9ULI0 1458 aa41.69■■■■■ 4.26
NPHS2-202ENST00000367616 NCAPD3P42695 1498 aa41.65■■■■■ 4.26
NPHS2-202ENST00000367616 SMARCA2P51531 1590 aa41.65■■■■■ 4.26
NPHS2-202ENST00000367616 TOP2AP11388 1531 aaKnown RBP41.52■■■■■ 4.24
NPHS2-202ENST00000367616 HMGXB3Q12766 1538 aa41.48■■■■■ 4.23
NPHS2-202ENST00000367616 BAZ1BQ9UIG0 1483 aaKnown RBP41.41■■■■■ 4.22
NPHS2-202ENST00000367616 CCDC88BA6NC98 1476 aa41.03■■■■■ 4.16
NPHS2-202ENST00000367616 NESP48681 1621 aa40.73■■■■■ 4.11
NPHS2-202ENST00000367616 LAMC3Q9Y6N6 1575 aa40.6■■■■■ 4.09
NPHS2-202ENST00000367616 ERCC6Q03468 1493 aa40.6■■■■■ 4.09
NPHS2-202ENST00000367616 CADPSQ9ULU8 1353 aa40.44■■■■■ 4.06
NPHS2-202ENST00000367616 CFTRP13569 1480 aa40.31■■■■■ 4.04
NPHS2-202ENST00000367616 PDS5BQ9NTI5 1447 aa40.3■■■■■ 4.04
NPHS2-202ENST00000367616 KIF21AQ7Z4S6 1674 aa40.27■■■■■ 4.04
NPHS2-202ENST00000367616 PRDM2Q13029 1718 aa40.24■■■■■ 4.03
NPHS2-202ENST00000367616 CHIC1Q5VXU3 224 aa40.21■■■■■ 4.03
NPHS2-202ENST00000367616 CUX2O14529 1486 aa40.18■■■■■ 4.02
NPHS2-202ENST00000367616 THOC2Q8NI27 1593 aaKnown RBP40.16■■■■■ 4.02
NPHS2-202ENST00000367616 ABCC8Q09428 1581 aa40.04■■■■■ 4
NPHS2-202ENST00000367616 FANCD2Q9BXW9 1451 aa40.01■■■■□ 3.99
NPHS2-202ENST00000367616 CEP164Q9UPV0 1460 aa39.97■■■■□ 3.99
NPHS2-202ENST00000367616 MRC2Q9UBG0 1479 aa39.93■■■■□ 3.98
NPHS2-202ENST00000367616 TRIM41Q8WV44 630 aa39.83■■■■□ 3.97
NPHS2-202ENST00000367616 WRNQ14191 1432 aaPredicted RBP eCLIP39.82■■■■□ 3.96
NPHS2-202ENST00000367616 WDR62O43379 1518 aa39.81■■■■□ 3.96
NPHS2-202ENST00000367616 SYNJ1O43426 1573 aa39.71■■■■□ 3.95
NPHS2-202ENST00000367616 URB2Q14146 1524 aaKnown RBP39.62■■■■□ 3.93
NPHS2-202ENST00000367616 TOP2BQ02880 1626 aa39.6■■■■□ 3.93
NPHS2-202ENST00000367616 BIVM-ERCC5R4GMW8 1640 aa39.6■■■■□ 3.93
NPHS2-202ENST00000367616 CUX1P39880 1505 aa39.6■■■■□ 3.93
NPHS2-202ENST00000367616 DNMBPQ6XZF7 1577 aa39.44■■■■□ 3.9
NPHS2-202ENST00000367616 TOPBP1Q92547 1522 aa39.36■■■■□ 3.89
NPHS2-202ENST00000367616 FGD5Q6ZNL6 1462 aa39.25■■■■□ 3.87
NPHS2-202ENST00000367616 SOGA1O94964 1423 aa39.13■■■■□ 3.85
NPHS2-202ENST00000367616 POLA1P09884 1462 aaPredicted RBP39.12■■■■□ 3.85
NPHS2-202ENST00000367616 IFT140Q96RY7 1462 aa39.12■■■■□ 3.85
NPHS2-202ENST00000367616 FAM9AQ8IZU1 332 aaPredicted RBP39.06■■■■□ 3.84
NPHS2-202ENST00000367616 RUSC2Q8N2Y8 1516 aa39.01■■■■□ 3.84
NPHS2-202ENST00000367616 DNAJC5Q9H3Z4 198 aa39.01■■■■□ 3.84
NPHS2-202ENST00000367616 ZNF608Q9ULD9 1512 aaPredicted RBP38.98■■■■□ 3.83
NPHS2-202ENST00000367616 EEA1Q15075 1411 aa38.98■■■■□ 3.83
NPHS2-202ENST00000367616 RAD54L2Q9Y4B4 1467 aa38.97■■■■□ 3.83
NPHS2-202ENST00000367616 TARBP1Q13395 1621 aaKnown RBP38.95■■■■□ 3.83
NPHS2-202ENST00000367616 WDR97A6NE52 1622 aa38.89■■■■□ 3.82
NPHS2-202ENST00000367616 ABCA10Q8WWZ4 1543 aa38.88■■■■□ 3.82
NPHS2-202ENST00000367616 KIF27Q86VH2 1401 aa38.85■■■■□ 3.81
NPHS2-202ENST00000367616 EIF4G3O43432 1585 aaKnown RBP38.85■■■■□ 3.81
NPHS2-202ENST00000367616 CSRNP3Q8WYN3 585 aa38.74■■■■□ 3.79
NPHS2-202ENST00000367616 AQRO60306 1485 aaKnown RBP eCLIP38.72■■■■□ 3.79
NPHS2-202ENST00000367616 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
NPHS2-202ENST00000367616 LOC105371045A0A1W2PR82 267 aa38.64■■■■□ 3.78
NPHS2-202ENST00000367616 TDRD9Q8NDG6 1382 aaKnown RBP38.63■■■■□ 3.77
NPHS2-202ENST00000367616 KIF21BO75037 1637 aa38.56■■■■□ 3.76
NPHS2-202ENST00000367616 GAPVD1Q14C86 1478 aa38.55■■■■□ 3.76
NPHS2-202ENST00000367616 EHMT2Q96KQ7 1210 aa38.54■■■■□ 3.76
NPHS2-202ENST00000367616 IGF1RP08069 1367 aa38.51■■■■□ 3.76
NPHS2-202ENST00000367616 PBRM1Q86U86 1689 aa38.48■■■■□ 3.75
NPHS2-202ENST00000367616 PRXQ9BXM0 1461 aa38.45■■■■□ 3.75
NPHS2-202ENST00000367616 OSCARQ8IYS5 282 aa38.45■■■■□ 3.75
NPHS2-202ENST00000367616 ERICH3Q5RHP9 1530 aa38.44■■■■□ 3.74
NPHS2-202ENST00000367616 GOLGA3Q08378 1498 aa38.43■■■■□ 3.74
NPHS2-202ENST00000367616 CUL7Q14999 1698 aa38.4■■■■□ 3.74
NPHS2-202ENST00000367616 GRIN2BQ13224 1484 aa38.4■■■■□ 3.74
NPHS2-202ENST00000367616 SNAPC4Q5SXM2 1469 aa38.39■■■■□ 3.74
NPHS2-202ENST00000367616 RAPGEF2Q9Y4G8 1499 aa38.37■■■■□ 3.73
NPHS2-202ENST00000367616 CHD1O14646 1710 aa38.37■■■■□ 3.73
NPHS2-202ENST00000367616 CARMIL1Q5VZK9 1371 aa38.33■■■■□ 3.73
NPHS2-202ENST00000367616 MAGI1Q96QZ7 1491 aaPredicted RBP38.32■■■■□ 3.73
NPHS2-202ENST00000367616 FBLN2P98095 1184 aa38.26■■■■□ 3.71
NPHS2-202ENST00000367616 UBTFP17480 764 aaKnown RBP38.21■■■■□ 3.71
NPHS2-202ENST00000367616 ADAMTS12P58397 1594 aa38.2■■■■□ 3.71
NPHS2-202ENST00000367616 SYNJ2O15056 1496 aa38.17■■■■□ 3.7
NPHS2-202ENST00000367616 TNIKQ9UKE5 1360 aa38.16■■■■□ 3.7
NPHS2-202ENST00000367616 CHMP7Q8WUX9 453 aaPredicted RBP38.12■■■■□ 3.69
NPHS2-202ENST00000367616 FHAD1B1AJZ9 1412 aa38.12■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms