Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH18Q9HCL0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH18Q9HCL0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDH18Q9HCL0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH18Q9HCL0 SPCS2P3-201ENST00000500401 656 ntBASIC24.62■■□□□ 1.53
PCDH18Q9HCL0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDH18Q9HCL0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH18Q9HCL0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
PCDH18Q9HCL0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH18Q9HCL0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH18Q9HCL0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH18Q9HCL0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH18Q9HCL0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDH18Q9HCL0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH18Q9HCL0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH18Q9HCL0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDH18Q9HCL0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
PCDH18Q9HCL0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH18Q9HCL0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH18Q9HCL0 KRT18P10-201ENST00000388836 1287 ntBASIC24.57■■□□□ 1.52
PCDH18Q9HCL0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDH18Q9HCL0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
PCDH18Q9HCL0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
PCDH18Q9HCL0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH18Q9HCL0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 DUX4L9-201ENST00000449051 1259 ntBASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 ABHD17AP5-201ENST00000580133 923 ntBASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 AC018755.3-202ENST00000596210 929 ntBASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH18Q9HCL0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH18Q9HCL0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.53■■□□□ 1.52
PCDH18Q9HCL0 KRT18P60-201ENST00000312876 1297 ntBASIC24.53■■□□□ 1.52
PCDH18Q9HCL0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDH18Q9HCL0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH18Q9HCL0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDH18Q9HCL0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 AC129492.7-201ENST00000622992 756 ntBASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH18Q9HCL0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH18Q9HCL0 RPS2P7-201ENST00000447334 885 ntBASIC24.5■■□□□ 1.51
PCDH18Q9HCL0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH18Q9HCL0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH18Q9HCL0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 MIR6765-201ENST00000614092 87 ntBASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH18Q9HCL0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH18Q9HCL0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDH18Q9HCL0 NTF6A-201ENST00000591175 560 ntBASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms