Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD6Q8TD26 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD6Q8TD26 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CHD6Q8TD26 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CHD6Q8TD26 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD6Q8TD26 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD6Q8TD26 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD6Q8TD26 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD6Q8TD26 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD6Q8TD26 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.14■■□□□ 1.13
CHD6Q8TD26 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD6Q8TD26 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD6Q8TD26 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD6Q8TD26 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD6Q8TD26 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD6Q8TD26 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD6Q8TD26 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD6Q8TD26 AL031602.1-201ENST00000633169 911 ntBASIC22.13■■□□□ 1.13
CHD6Q8TD26 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD6Q8TD26 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD6Q8TD26 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD6Q8TD26 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD6Q8TD26 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD6Q8TD26 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD6Q8TD26 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD6Q8TD26 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD6Q8TD26 WHAMMP3-201ENST00000611636 1609 ntBASIC22.11■■□□□ 1.13
CHD6Q8TD26 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD6Q8TD26 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD6Q8TD26 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD6Q8TD26 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD6Q8TD26 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CHD6Q8TD26 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.11■■□□□ 1.13
CHD6Q8TD26 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD6Q8TD26 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD6Q8TD26 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD6Q8TD26 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD6Q8TD26 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD6Q8TD26 AP002414.2-202ENST00000590929 1450 ntBASIC22.1■■□□□ 1.13
CHD6Q8TD26 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD6Q8TD26 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD6Q8TD26 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CHD6Q8TD26 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CHD6Q8TD26 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD6Q8TD26 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.08■■□□□ 1.13
CHD6Q8TD26 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.08■■□□□ 1.13
CHD6Q8TD26 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD6Q8TD26 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.08■■□□□ 1.12
CHD6Q8TD26 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.08■■□□□ 1.12
CHD6Q8TD26 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD6Q8TD26 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD6Q8TD26 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHD6Q8TD26 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD6Q8TD26 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L2-201ENST00000561772 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L6-201ENST00000626483 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L1-201ENST00000627662 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L8-201ENST00000629013 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L3-201ENST00000630187 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L7-201ENST00000630678 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DUX4L5-201ENST00000630834 1275 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD6Q8TD26 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CHD6Q8TD26 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CHD6Q8TD26 SRD5A1P1-201ENST00000442297 786 ntBASIC22.07■■□□□ 1.12
CHD6Q8TD26 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CHD6Q8TD26 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.06■■□□□ 1.12
CHD6Q8TD26 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHD6Q8TD26 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHD6Q8TD26 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.06■■□□□ 1.12
CHD6Q8TD26 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHD6Q8TD26 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CHD6Q8TD26 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.06■■□□□ 1.12
CHD6Q8TD26 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 AL359504.2-201ENST00000605506 1601 ntBASIC22.05■■□□□ 1.12
CHD6Q8TD26 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 AC027682.1-201ENST00000562846 899 ntBASIC22.05■■□□□ 1.12
CHD6Q8TD26 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CHD6Q8TD26 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.04■■□□□ 1.12
CHD6Q8TD26 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.04■■□□□ 1.12
CHD6Q8TD26 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD6Q8TD26 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.03■■□□□ 1.12
CHD6Q8TD26 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.03■■□□□ 1.12
CHD6Q8TD26 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CHD6Q8TD26 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHD6Q8TD26 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CHD6Q8TD26 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHD6Q8TD26 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CHD6Q8TD26 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CHD6Q8TD26 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.01■■□□□ 1.11
CHD6Q8TD26 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22■■□□□ 1.11
CHD6Q8TD26 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms