RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 NISCHQ9Y2I1 1504 aa51.18■■■■■ 5.78
TARDBP-228ENST00000629725 ABCC9O60706 1549 aa46.62■■■■■ 5.05
TARDBP-228ENST00000629725 CCDC180Q9P1Z9 1646 aa46.17■■■■■ 4.98
TARDBP-228ENST00000629725 RB1CC1Q8TDY2 1594 aa44.18■■■■■ 4.66
TARDBP-228ENST00000629725 DNAJC5BQ9UF47 199 aa44.15■■■■■ 4.66
TARDBP-228ENST00000629725 NACADO15069 1562 aa43.75■■■■■ 4.59
TARDBP-228ENST00000629725 DCAF8L2P0C7V8 631 aa43.45■■■■■ 4.55
TARDBP-228ENST00000629725 PABPN1Q86U42 306 aaKnown RBP eCLIP43.32■■■■■ 4.53
TARDBP-228ENST00000629725 UNC13AQ9UPW8 1703 aa43.22■■■■■ 4.51
TARDBP-228ENST00000629725 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
TARDBP-228ENST00000629725 BICRAQ9NZM4 1560 aa42.89■■■■■ 4.46
TARDBP-228ENST00000629725 ZCCHC6Q5VYS8 1495 aaKnown RBP42.3■■■■■ 4.36
TARDBP-228ENST00000629725 SHROOM4Q9ULL8 1493 aa42.27■■■■■ 4.36
TARDBP-228ENST00000629725 DCAF1Q9Y4B6 1507 aa42.25■■■■■ 4.35
TARDBP-228ENST00000629725 CC2D2AQ9P2K1 1620 aa42.11■■■■■ 4.33
TARDBP-228ENST00000629725 CECR2Q9BXF3 1484 aa42.05■■■■■ 4.32
TARDBP-228ENST00000629725 SCRIBQ14160 1630 aa42.03■■■■■ 4.32
TARDBP-228ENST00000629725 EIF4G1Q04637 1599 aaKnown RBP41.89■■■■■ 4.3
TARDBP-228ENST00000629725 DNAJC5Q9H3Z4 198 aa40.92■■■■■ 4.14
TARDBP-228ENST00000629725 CUX2O14529 1486 aa40.39■■■■■ 4.06
TARDBP-228ENST00000629725 NCAPD3P42695 1498 aa40.39■■■■■ 4.06
TARDBP-228ENST00000629725 ERCC6Q03468 1493 aa40.32■■■■■ 4.04
TARDBP-228ENST00000629725 ATAD2BQ9ULI0 1458 aa40.19■■■■■ 4.02
TARDBP-228ENST00000629725 SMARCA2P51531 1590 aa40.07■■■■■ 4.01
TARDBP-228ENST00000629725 HMGXB3Q12766 1538 aa40.05■■■■■ 4
TARDBP-228ENST00000629725 SMARCA4P51532 1647 aa40.04■■■■■ 4
TARDBP-228ENST00000629725 NESP48681 1621 aa39.91■■■■□ 3.98
TARDBP-228ENST00000629725 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
TARDBP-228ENST00000629725 BAZ1AQ9NRL2 1556 aaPredicted RBP39.77■■■■□ 3.96
TARDBP-228ENST00000629725 PEG3Q9GZU2 1588 aa39.66■■■■□ 3.94
TARDBP-228ENST00000629725 THOC2Q8NI27 1593 aaKnown RBP39.61■■■■□ 3.93
TARDBP-228ENST00000629725 LAMC3Q9Y6N6 1575 aa39.58■■■■□ 3.93
TARDBP-228ENST00000629725 MROH2BQ7Z745 1585 aa39.42■■■■□ 3.9
TARDBP-228ENST00000629725 KIF21AQ7Z4S6 1674 aa39.42■■■■□ 3.9
TARDBP-228ENST00000629725 PDS5BQ9NTI5 1447 aa39.36■■■■□ 3.89
TARDBP-228ENST00000629725 CADPSQ9ULU8 1353 aa39.14■■■■□ 3.86
TARDBP-228ENST00000629725 MRC2Q9UBG0 1479 aa39.03■■■■□ 3.84
TARDBP-228ENST00000629725 WDR62O43379 1518 aa38.96■■■■□ 3.83
TARDBP-228ENST00000629725 WIZO95785 1651 aa38.96■■■■□ 3.83
TARDBP-228ENST00000629725 TRIM41Q8WV44 630 aa38.94■■■■□ 3.82
TARDBP-228ENST00000629725 CEP164Q9UPV0 1460 aa38.79■■■■□ 3.8
TARDBP-228ENST00000629725 FANCD2Q9BXW9 1451 aa38.7■■■■□ 3.79
TARDBP-228ENST00000629725 CFTRP13569 1480 aa38.59■■■■□ 3.77
TARDBP-228ENST00000629725 OSCARQ8IYS5 282 aa38.48■■■■□ 3.75
TARDBP-228ENST00000629725 RSF1Q96T23 1441 aaPredicted RBP38.42■■■■□ 3.74
TARDBP-228ENST00000629725 TOP2AP11388 1531 aaKnown RBP38.41■■■■□ 3.74
TARDBP-228ENST00000629725 URB2Q14146 1524 aaKnown RBP38.4■■■■□ 3.74
TARDBP-228ENST00000629725 PRDM2Q13029 1718 aa38.22■■■■□ 3.71
TARDBP-228ENST00000629725 RIMBP3CA6NJZ7 1639 aa38.03■■■■□ 3.68
TARDBP-228ENST00000629725 RIMBP3BA6NNM3 1639 aa38.03■■■■□ 3.68
TARDBP-228ENST00000629725 RIMBP3Q9UFD9 1639 aa38.03■■■■□ 3.68
TARDBP-228ENST00000629725 IFT140Q96RY7 1462 aa38.03■■■■□ 3.68
TARDBP-228ENST00000629725 ZNF608Q9ULD9 1512 aaPredicted RBP38.01■■■■□ 3.67
TARDBP-228ENST00000629725 CCDC88BA6NC98 1476 aa37.98■■■■□ 3.67
TARDBP-228ENST00000629725 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
TARDBP-228ENST00000629725 ARHGEF11O15085 1522 aa37.85■■■■□ 3.65
TARDBP-228ENST00000629725 ABCC8Q09428 1581 aa37.81■■■■□ 3.64
TARDBP-228ENST00000629725 EIF4G3O43432 1585 aaKnown RBP37.8■■■■□ 3.64
TARDBP-228ENST00000629725 DNMBPQ6XZF7 1577 aa37.73■■■■□ 3.63
TARDBP-228ENST00000629725 CHD1O14646 1710 aa37.63■■■■□ 3.61
TARDBP-228ENST00000629725 TARBP1Q13395 1621 aaKnown RBP37.62■■■■□ 3.61
TARDBP-228ENST00000629725 CYB5RLQ6IPT4 315 aa37.62■■■■□ 3.61
TARDBP-228ENST00000629725 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.612e-7■■□□□ 14.3
TARDBP-228ENST00000629725 FBLN2P98095 1184 aa37.49■■■■□ 3.59
TARDBP-228ENST00000629725 POLA1P09884 1462 aaPredicted RBP37.49■■■■□ 3.59
TARDBP-228ENST00000629725 ARAP1Q96P48 1450 aa37.43■■■■□ 3.58
TARDBP-228ENST00000629725 TRHP20396 242 aaPredicted RBP37.37■■■■□ 3.57
TARDBP-228ENST00000629725 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
TARDBP-228ENST00000629725 SOGA1O94964 1423 aa37.32■■■■□ 3.56
TARDBP-228ENST00000629725 TDRD9Q8NDG6 1382 aaKnown RBP37.3■■■■□ 3.56
TARDBP-228ENST00000629725 WDR97A6NE52 1622 aa37.21■■■■□ 3.55
TARDBP-228ENST00000629725 SNAPC4Q5SXM2 1469 aa37.21■■■■□ 3.55
TARDBP-228ENST00000629725 FGD5Q6ZNL6 1462 aa37.19■■■■□ 3.54
TARDBP-228ENST00000629725 CLASP1Q7Z460 1538 aa37.15■■■■□ 3.54
TARDBP-228ENST00000629725 CHMP7Q8WUX9 453 aaPredicted RBP37.13■■■■□ 3.53
TARDBP-228ENST00000629725 SYNJ1O43426 1573 aa37.11■■■■□ 3.53
TARDBP-228ENST00000629725 MAGI1Q96QZ7 1491 aaPredicted RBP37.1■■■■□ 3.53
TARDBP-228ENST00000629725 CUX1P39880 1505 aa37.07■■■■□ 3.53
TARDBP-228ENST00000629725 GRIN2BQ13224 1484 aa37.05■■■■□ 3.52
TARDBP-228ENST00000629725 SYNJ2O15056 1496 aa36.99■■■■□ 3.51
TARDBP-228ENST00000629725 PBRM1Q86U86 1689 aa36.91■■■■□ 3.5
TARDBP-228ENST00000629725 GAPVD1Q14C86 1478 aa36.86■■■■□ 3.49
TARDBP-228ENST00000629725 ABCA10Q8WWZ4 1543 aa36.74■■■■□ 3.47
TARDBP-228ENST00000629725 ABCA5Q8WWZ7 1642 aa36.74■■■■□ 3.47
TARDBP-228ENST00000629725 AEBP2Q6ZN18 517 aaPredicted RBP36.65■■■■□ 3.46
TARDBP-228ENST00000629725 GRIN2AQ12879 1464 aa36.57■■■■□ 3.45
TARDBP-228ENST00000629725 ERCC6L2Q5T890 1561 aa36.53■■■■□ 3.44
TARDBP-228ENST00000629725 WRNQ14191 1432 aaPredicted RBP eCLIP36.51■■■■□ 3.436e-7■□□□□ 11.3
TARDBP-228ENST00000629725 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
TARDBP-228ENST00000629725 CEP170Q5SW79 1584 aa36.47■■■■□ 3.43
TARDBP-228ENST00000629725 NUP160Q12769 1436 aa36.45■■■■□ 3.43
TARDBP-228ENST00000629725 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
TARDBP-228ENST00000629725 BIVM-ERCC5R4GMW8 1640 aa36.37■■■■□ 3.41
TARDBP-228ENST00000629725 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
TARDBP-228ENST00000629725 SHROOM2Q13796 1616 aa36.37■■■■□ 3.41
TARDBP-228ENST00000629725 FHAD1B1AJZ9 1412 aa36.36■■■■□ 3.41
TARDBP-228ENST00000629725 ERICH3Q5RHP9 1530 aa36.28■■■■□ 3.4
TARDBP-228ENST00000629725 KIF13AQ9H1H9 1805 aa36.18■■■■□ 3.38
TARDBP-228ENST00000629725 PRG4Q92954 1404 aaPredicted RBP36.16■■■■□ 3.38
TARDBP-228ENST00000629725 JPH4Q96JJ6 628 aa36.1■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms