Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.81■□□□□ 0.92
RHBDD3Q9Y3P4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.81■□□□□ 0.92
RHBDD3Q9Y3P4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 AC092296.2-201ENST00000589470 999 ntBASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RHBDD3Q9Y3P4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RHBDD3Q9Y3P4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 AC025884.2-201ENST00000553429 711 ntBASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RHBDD3Q9Y3P4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 SMPD5-203ENST00000639008 1464 ntBASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RHBDD3Q9Y3P4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.77■□□□□ 0.91
RHBDD3Q9Y3P4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDD3Q9Y3P4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDD3Q9Y3P4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RHBDD3Q9Y3P4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.76■□□□□ 0.91
RHBDD3Q9Y3P4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.76■□□□□ 0.91
RHBDD3Q9Y3P4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 ECEL1P2-201ENST00000461596 1295 ntBASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RHBDD3Q9Y3P4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RHBDD3Q9Y3P4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RHBDD3Q9Y3P4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 GPX1-201ENST00000419349 1106 ntBASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 MIR3960-201ENST00000583311 91 ntBASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RHBDD3Q9Y3P4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RHBDD3Q9Y3P4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RHBDD3Q9Y3P4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RHBDD3Q9Y3P4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDD3Q9Y3P4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.68■□□□□ 0.9
RHBDD3Q9Y3P4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RHBDD3Q9Y3P4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms