Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX6-2Q9C056 AL121603.2-201ENST00000557373 2117 ntBASIC19.24■□□□□ 0.67
NKX6-2Q9C056 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 LINC01124-201ENST00000409786 2117 ntBASIC19.23■□□□□ 0.67
NKX6-2Q9C056 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX6-2Q9C056 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.22■□□□□ 0.67
NKX6-2Q9C056 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX6-2Q9C056 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX6-2Q9C056 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 ABCB10P4-201ENST00000566803 2184 ntBASIC19.19■□□□□ 0.66
NKX6-2Q9C056 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX6-2Q9C056 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX6-2Q9C056 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX6-2Q9C056 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NKX6-2Q9C056 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.17■□□□□ 0.66
NKX6-2Q9C056 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.16■□□□□ 0.66
NKX6-2Q9C056 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 EP400NL-214ENST00000641289 2402 ntBASIC19.15■□□□□ 0.66
NKX6-2Q9C056 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 PKD1P6-201ENST00000343738 4769 ntBASIC19.15■□□□□ 0.66
NKX6-2Q9C056 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.15■□□□□ 0.66
NKX6-2Q9C056 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX6-2Q9C056 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms