RNA–Protein interactions for RNA: ENST00000379214.8

LGR4-201, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LGR4, Length 5,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-201ENST00000379214 DCAF8L2P0C7V8 631 aa36.64■■■■□ 3.46
LGR4-201ENST00000379214 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
LGR4-201ENST00000379214 SUPT5HO00267 1087 aaKnown RBP34.82■■■■□ 3.16
LGR4-201ENST00000379214 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
LGR4-201ENST00000379214 PELP1Q8IZL8 1130 aaKnown RBP33.55■■■□□ 2.96
LGR4-201ENST00000379214 APLP2Q06481 763 aa33.54■■■□□ 2.96
LGR4-201ENST00000379214 EHMT2Q96KQ7 1210 aa33.3■■■□□ 2.92
LGR4-201ENST00000379214 FAM9AQ8IZU1 332 aaPredicted RBP33.25■■■□□ 2.91
LGR4-201ENST00000379214 ZEB1P37275 1124 aaPredicted RBP32.56■■■□□ 2.8
LGR4-201ENST00000379214 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
LGR4-201ENST00000379214 PCGF6Q9BYE7 350 aa32.44■■■□□ 2.78
LGR4-201ENST00000379214 CENPBP07199 599 aaPredicted RBP32.26■■■□□ 2.76
LGR4-201ENST00000379214 TTBK1Q5TCY1 1321 aaPredicted RBP32.26■■■□□ 2.75
LGR4-201ENST00000379214 CCER1Q8TC90 406 aaPredicted RBP32.13■■■□□ 2.73
LGR4-201ENST00000379214 UBTFP17480 764 aaKnown RBP32.1■■■□□ 2.73
LGR4-201ENST00000379214 RANGAP1P46060 587 aaPredicted RBP32.05■■■□□ 2.72
LGR4-201ENST00000379214 ATP1B4Q9UN42 357 aaPredicted RBP32.01■■■□□ 2.71
LGR4-201ENST00000379214 ERICH6Q7L0X2 663 aa31.82■■■□□ 2.68
LGR4-201ENST00000379214 NEFLP07196 543 aa31.61■■■□□ 2.65
LGR4-201ENST00000379214 TRIM26Q12899 539 aaPredicted RBP31.44■■■□□ 2.62
LGR4-201ENST00000379214 MYT1Q01538 1121 aa31.09■■■□□ 2.57
LGR4-201ENST00000379214 YTHDC1Q96MU7 727 aaKnown RBP31.08■■■□□ 2.57
LGR4-201ENST00000379214 PPARGC1BQ86YN6 1023 aaKnown RBP31.02■■■□□ 2.56
LGR4-201ENST00000379214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31■■■□□ 2.55
LGR4-201ENST00000379214 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
LGR4-201ENST00000379214 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
LGR4-201ENST00000379214 MYT1LQ9UL68 1186 aa30.9■■■□□ 2.54
LGR4-201ENST00000379214 HRCP23327 699 aa30.88■■■□□ 2.53
LGR4-201ENST00000379214 ITGAEP38570 1179 aa30.84■■■□□ 2.53
LGR4-201ENST00000379214 LOC105371045A0A1W2PR82 267 aa30.7■■■□□ 2.51
LGR4-201ENST00000379214 DAXXQ9UER7 740 aaPredicted RBP30.65■■■□□ 2.5
LGR4-201ENST00000379214 POLR3GLQ9BT43 218 aa30.61■■■□□ 2.49
LGR4-201ENST00000379214 ABCC9O60706 1549 aa30.39■■■□□ 2.46
LGR4-201ENST00000379214 FAM50AQ14320 339 aaKnown RBP30.27■■■□□ 2.44
LGR4-201ENST00000379214 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
LGR4-201ENST00000379214 DIEXFQ68CQ4 756 aaKnown RBP30.19■■■□□ 2.42
LGR4-201ENST00000379214 TRIM52Q96A61 297 aa30.14■■■□□ 2.42
LGR4-201ENST00000379214 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
LGR4-201ENST00000379214 CNGB1Q14028 1251 aaPredicted RBP30.04■■■□□ 2.4
LGR4-201ENST00000379214 CLSPNQ9HAW4 1339 aa29.93■■■□□ 2.38
LGR4-201ENST00000379214 ZNF316A6NFI3 1004 aaPredicted RBP29.89■■■□□ 2.38
LGR4-201ENST00000379214 NEUROD1Q13562 356 aa29.86■■■□□ 2.37
LGR4-201ENST00000379214 RTL5Q5HYW3 569 aaPredicted RBP29.86■■■□□ 2.37
LGR4-201ENST00000379214 ANP32CO43423 234 aa29.85■■■□□ 2.37
LGR4-201ENST00000379214 CSRNP3Q8WYN3 585 aa29.77■■■□□ 2.36
LGR4-201ENST00000379214 FBLN2P98095 1184 aa29.69■■■□□ 2.34
LGR4-201ENST00000379214 CDK11AQ9UQ88 783 aaPredicted RBP29.63■■■□□ 2.33
LGR4-201ENST00000379214 ZNF326Q5BKZ1 582 aaKnown RBP29.62■■■□□ 2.33
LGR4-201ENST00000379214 ZBTB47Q9UFB7 747 aaPredicted RBP29.59■■■□□ 2.33
LGR4-201ENST00000379214 NEFMP07197 916 aa29.49■■■□□ 2.31
LGR4-201ENST00000379214 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
LGR4-201ENST00000379214 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
LGR4-201ENST00000379214 P3H3Q8IVL6 736 aa29.38■■■□□ 2.29
LGR4-201ENST00000379214 CANXP27824 592 aaKnown RBP29.34■■■□□ 2.29
LGR4-201ENST00000379214 GTF3C3Q9Y5Q9 886 aa29.33■■■□□ 2.29
LGR4-201ENST00000379214 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
LGR4-201ENST00000379214 BCANQ96GW7 911 aa29.25■■■□□ 2.27
LGR4-201ENST00000379214 TONSLQ96HA7 1378 aa29.19■■■□□ 2.26
LGR4-201ENST00000379214 CCDC180Q9P1Z9 1646 aa29.18■■■□□ 2.26
LGR4-201ENST00000379214 DCAF1Q9Y4B6 1507 aa29.17■■■□□ 2.26
LGR4-201ENST00000379214 ARID3CA6NKF2 412 aa29.15■■■□□ 2.26
LGR4-201ENST00000379214 ESF1Q9H501 851 aaKnown RBP29.12■■■□□ 2.25
LGR4-201ENST00000379214 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
LGR4-201ENST00000379214 NPM1P06748 294 aaKnown RBP eCLIP29.05■■■□□ 2.24
LGR4-201ENST00000379214 SLC24A1O60721 1099 aa29.03■■■□□ 2.24
LGR4-201ENST00000379214 ANP32AP39687 249 aaKnown RBP29.03■■■□□ 2.24
LGR4-201ENST00000379214 STAG3Q9UJ98 1225 aa28.91■■■□□ 2.22
LGR4-201ENST00000379214 EEA1Q15075 1411 aa28.85■■■□□ 2.21
LGR4-201ENST00000379214 TSPY4P0CV99 314 aa28.83■■■□□ 2.21
LGR4-201ENST00000379214 TSPY10P0CW01 314 aa28.83■■■□□ 2.21
LGR4-201ENST00000379214 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
LGR4-201ENST00000379214 MTUS2Q5JR59 1369 aa28.8■■■□□ 2.2
LGR4-201ENST00000379214 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
LGR4-201ENST00000379214 UPF2Q9HAU5 1272 aaKnown RBP28.74■■■□□ 2.19
LGR4-201ENST00000379214 HNRNPUQ00839 825 aaKnown RBP eCLIP28.73■■■□□ 2.19
LGR4-201ENST00000379214 CLIP1P30622 1438 aa28.72■■■□□ 2.19
LGR4-201ENST00000379214 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.72■■■□□ 2.19
LGR4-201ENST00000379214 BCL11AQ9H165 835 aa28.69■■■□□ 2.18
LGR4-201ENST00000379214 DDX10Q13206 875 aaKnown RBP28.68■■■□□ 2.18
LGR4-201ENST00000379214 RSF1Q96T23 1441 aaPredicted RBP28.67■■■□□ 2.18
LGR4-201ENST00000379214 TMC1Q8TDI8 760 aa28.66■■■□□ 2.18
LGR4-201ENST00000379214 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
LGR4-201ENST00000379214 FKBP8Q14318 412 aa28.66■■■□□ 2.18
LGR4-201ENST00000379214 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
LGR4-201ENST00000379214 ANP32BQ92688 251 aaKnown RBP28.62■■■□□ 2.17
LGR4-201ENST00000379214 FAM9BQ8IZU0 186 aa28.61■■■□□ 2.17
LGR4-201ENST00000379214 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
LGR4-201ENST00000379214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.59■■■□□ 2.172e-9■■■□□ 16.6
LGR4-201ENST00000379214 WDR43Q15061 677 aaKnown RBP eCLIP28.59■■■□□ 2.17
LGR4-201ENST00000379214 HSP90AA1P07900 732 aaKnown RBP28.57■■■□□ 2.16
LGR4-201ENST00000379214 NPM2Q86SE8 214 aaKnown RBP28.56■■■□□ 2.16
LGR4-201ENST00000379214 NACADO15069 1562 aa28.54■■■□□ 2.16
LGR4-201ENST00000379214 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
LGR4-201ENST00000379214 MRS2Q9HD23 443 aa28.48■■■□□ 2.15
LGR4-201ENST00000379214 CCDC136Q96JN2 1154 aa28.46■■■□□ 2.15
LGR4-201ENST00000379214 PLEKHD1A6NEE1 506 aa28.43■■■□□ 2.14
LGR4-201ENST00000379214 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
LGR4-201ENST00000379214 KDM2AQ9Y2K7 1162 aa28.4■■■□□ 2.14
LGR4-201ENST00000379214 KIF27Q86VH2 1401 aa28.39■■■□□ 2.14
LGR4-201ENST00000379214 CEP162Q5TB80 1403 aa28.39■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms