RNA–Protein interactions for RNA: ENST00000585527.1

LINGO3-201, Transcript of leucine rich repeat and Ig domain containing 3, humanhuman

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Gene LINGO3, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3-201ENST00000585527 NISCHQ9Y2I1 1504 aa47.15■■■■■ 5.14
LINGO3-201ENST00000585527 CCDC180Q9P1Z9 1646 aa40.25■■■■■ 4.03
LINGO3-201ENST00000585527 ZCCHC6Q5VYS8 1495 aaKnown RBP39.83■■■■□ 3.97
LINGO3-201ENST00000585527 SHROOM4Q9ULL8 1493 aa39.62■■■■□ 3.93
LINGO3-201ENST00000585527 DCAF1Q9Y4B6 1507 aa38.86■■■■□ 3.81
LINGO3-201ENST00000585527 DCAF8L2P0C7V8 631 aa38.84■■■■□ 3.81
LINGO3-201ENST00000585527 SUPT5HO00267 1087 aaKnown RBP38.81■■■■□ 3.8
LINGO3-201ENST00000585527 MYO15BQ96JP2 1530 aa37.91■■■■□ 3.66
LINGO3-201ENST00000585527 CHIC1Q5VXU3 224 aa37.8■■■■□ 3.64
LINGO3-201ENST00000585527 ABCC9O60706 1549 aa37.47■■■■□ 3.59
LINGO3-201ENST00000585527 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
LINGO3-201ENST00000585527 NACADO15069 1562 aa37.31■■■■□ 3.56
LINGO3-201ENST00000585527 RSF1Q96T23 1441 aaPredicted RBP37.18■■■■□ 3.54
LINGO3-201ENST00000585527 RB1CC1Q8TDY2 1594 aa36.74■■■■□ 3.47
LINGO3-201ENST00000585527 CECR2Q9BXF3 1484 aa36.66■■■■□ 3.46
LINGO3-201ENST00000585527 MROH2BQ7Z745 1585 aa36.54■■■■□ 3.44
LINGO3-201ENST00000585527 LOC105371045A0A1W2PR82 267 aa36.52■■■■□ 3.44
LINGO3-201ENST00000585527 TRIM41Q8WV44 630 aa36.32■■■■□ 3.41
LINGO3-201ENST00000585527 WIZO95785 1651 aa36.27■■■■□ 3.4
LINGO3-201ENST00000585527 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
LINGO3-201ENST00000585527 PCGF6Q9BYE7 350 aa36.2■■■■□ 3.39
LINGO3-201ENST00000585527 HRCP23327 699 aa36.14■■■■□ 3.38
LINGO3-201ENST00000585527 UNC13AQ9UPW8 1703 aa35.99■■■■□ 3.35
LINGO3-201ENST00000585527 SMARCA4P51532 1647 aa35.9■■■■□ 3.34
LINGO3-201ENST00000585527 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
LINGO3-201ENST00000585527 FAM9AQ8IZU1 332 aaPredicted RBP35.79■■■■□ 3.32
LINGO3-201ENST00000585527 EIF4G1Q04637 1599 aaKnown RBP35.77■■■■□ 3.32
LINGO3-201ENST00000585527 TRIM26Q12899 539 aaPredicted RBP35.76■■■■□ 3.32
LINGO3-201ENST00000585527 BICRAQ9NZM4 1560 aa35.66■■■■□ 3.3
LINGO3-201ENST00000585527 CCDC88BA6NC98 1476 aa35.64■■■■□ 3.3
LINGO3-201ENST00000585527 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
LINGO3-201ENST00000585527 PABPN1Q86U42 306 aaKnown RBP eCLIP35.55■■■■□ 3.28
LINGO3-201ENST00000585527 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
LINGO3-201ENST00000585527 EHMT2Q96KQ7 1210 aa35.32■■■■□ 3.24
LINGO3-201ENST00000585527 ABCC8Q09428 1581 aa35.32■■■■□ 3.24
LINGO3-201ENST00000585527 PPARGC1BQ86YN6 1023 aaKnown RBP35.2■■■■□ 3.23
LINGO3-201ENST00000585527 ATAD2BQ9ULI0 1458 aa35.09■■■■□ 3.21
LINGO3-201ENST00000585527 SOGA1O94964 1423 aa35.01■■■■□ 3.19
LINGO3-201ENST00000585527 EEA1Q15075 1411 aa35■■■■□ 3.19
LINGO3-201ENST00000585527 ZEB1P37275 1124 aaPredicted RBP34.93■■■■□ 3.18
LINGO3-201ENST00000585527 BAZ1BQ9UIG0 1483 aaKnown RBP34.93■■■■□ 3.18
LINGO3-201ENST00000585527 WRNQ14191 1432 aaPredicted RBP eCLIP34.91■■■■□ 3.18
LINGO3-201ENST00000585527 CSRNP3Q8WYN3 585 aa34.89■■■■□ 3.18
LINGO3-201ENST00000585527 TNIKQ9UKE5 1360 aa34.84■■■■□ 3.17
LINGO3-201ENST00000585527 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
LINGO3-201ENST00000585527 CEP162Q5TB80 1403 aa34.75■■■■□ 3.15
LINGO3-201ENST00000585527 SYNJ1O43426 1573 aa34.67■■■■□ 3.14
LINGO3-201ENST00000585527 GOLGA3Q08378 1498 aa34.61■■■■□ 3.13
LINGO3-201ENST00000585527 UBTFP17480 764 aaKnown RBP34.59■■■■□ 3.13
LINGO3-201ENST00000585527 NCAPD3P42695 1498 aa34.55■■■■□ 3.12
LINGO3-201ENST00000585527 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
LINGO3-201ENST00000585527 CEP164Q9UPV0 1460 aa34.48■■■■□ 3.11
LINGO3-201ENST00000585527 KIF21BO75037 1637 aa34.44■■■■□ 3.1
LINGO3-201ENST00000585527 TOP2BQ02880 1626 aa34.38■■■■□ 3.09
LINGO3-201ENST00000585527 BIVM-ERCC5R4GMW8 1640 aa34.25■■■■□ 3.07
LINGO3-201ENST00000585527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.2■■■■□ 3.07
LINGO3-201ENST00000585527 RAPGEF2Q9Y4G8 1499 aa34.18■■■■□ 3.06
LINGO3-201ENST00000585527 CLIP1P30622 1438 aa34.17■■■■□ 3.06
LINGO3-201ENST00000585527 CFTRP13569 1480 aa34.16■■■■□ 3.06
LINGO3-201ENST00000585527 CCER1Q8TC90 406 aaPredicted RBP34.15■■■■□ 3.06
LINGO3-201ENST00000585527 TTBK1Q5TCY1 1321 aaPredicted RBP34.13■■■■□ 3.05
LINGO3-201ENST00000585527 CUX1P39880 1505 aa34.04■■■■□ 3.04
LINGO3-201ENST00000585527 VPS8Q8N3P4 1428 aa34.04■■■■□ 3.04
LINGO3-201ENST00000585527 PRXQ9BXM0 1461 aa34.01■■■■□ 3.04
LINGO3-201ENST00000585527 ERICH3Q5RHP9 1530 aa33.98■■■■□ 3.03
LINGO3-201ENST00000585527 KIF27Q86VH2 1401 aa33.89■■■■□ 3.02
LINGO3-201ENST00000585527 CADPSQ9ULU8 1353 aa33.81■■■■□ 3
LINGO3-201ENST00000585527 APLP2Q06481 763 aa33.81■■■■□ 3
LINGO3-201ENST00000585527 PRDM2Q13029 1718 aa33.77■■■■□ 3
LINGO3-201ENST00000585527 RANGAP1P46060 587 aaPredicted RBP33.73■■■□□ 2.99
LINGO3-201ENST00000585527 ARAP1Q96P48 1450 aa33.65■■■□□ 2.98
LINGO3-201ENST00000585527 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
LINGO3-201ENST00000585527 HNRNPUL2Q1KMD3 747 aaKnown RBP33.57■■■□□ 2.97
LINGO3-201ENST00000585527 IGF1RP08069 1367 aa33.57■■■□□ 2.96
LINGO3-201ENST00000585527 CUX2O14529 1486 aa33.53■■■□□ 2.96
LINGO3-201ENST00000585527 FGD5Q6ZNL6 1462 aa33.46■■■□□ 2.95
LINGO3-201ENST00000585527 ARHGAP35Q9NRY4 1499 aa33.44■■■□□ 2.94
LINGO3-201ENST00000585527 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
LINGO3-201ENST00000585527 KANK4Q5T7N3 995 aaPredicted RBP33.4■■■□□ 2.94
LINGO3-201ENST00000585527 CARMIL1Q5VZK9 1371 aa33.39■■■□□ 2.93
LINGO3-201ENST00000585527 DIEXFQ68CQ4 756 aaKnown RBP33.36■■■□□ 2.93
LINGO3-201ENST00000585527 RRBP1Q9P2E9 1410 aaKnown RBP33.26■■■□□ 2.91
LINGO3-201ENST00000585527 ZNF316A6NFI3 1004 aaPredicted RBP33.25■■■□□ 2.91
LINGO3-201ENST00000585527 DNMBPQ6XZF7 1577 aa33.23■■■□□ 2.91
LINGO3-201ENST00000585527 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
LINGO3-201ENST00000585527 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
LINGO3-201ENST00000585527 CLSPNQ9HAW4 1339 aa33.16■■■□□ 2.9
LINGO3-201ENST00000585527 MAP3K1Q13233 1512 aa33.14■■■□□ 2.9
LINGO3-201ENST00000585527 NESP48681 1621 aa33.14■■■□□ 2.9
LINGO3-201ENST00000585527 POLA1P09884 1462 aaPredicted RBP33.14■■■□□ 2.9
LINGO3-201ENST00000585527 RAD54L2Q9Y4B4 1467 aa33.11■■■□□ 2.89
LINGO3-201ENST00000585527 CCNB3Q8WWL7 1395 aa33.08■■■□□ 2.89
LINGO3-201ENST00000585527 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
LINGO3-201ENST00000585527 DHX57Q6P158 1386 aaKnown RBP33.05■■■□□ 2.88
LINGO3-201ENST00000585527 TIAM1Q13009 1591 aa33.01■■■□□ 2.88
LINGO3-201ENST00000585527 FHAD1B1AJZ9 1412 aa33.01■■■□□ 2.87
LINGO3-201ENST00000585527 SCAF1Q9H7N4 1312 aaKnown RBP32.99■■■□□ 2.87
LINGO3-201ENST00000585527 LRRC9Q6ZRR7 1453 aa32.93■■■□□ 2.86
LINGO3-201ENST00000585527 CUL7Q14999 1698 aa32.92■■■□□ 2.86
LINGO3-201ENST00000585527 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms