RNA–Protein interactions for RNA: ENST00000404168.1

CMPK2-202, Transcript of cytidine/uridine monophosphate kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMPK2, Length 2,042 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMPK2-202ENST00000404168 NISCHQ9Y2I1 1504 aa48.63■■■■■ 5.38
CMPK2-202ENST00000404168 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
CMPK2-202ENST00000404168 ZCCHC6Q5VYS8 1495 aaKnown RBP40.87■■■■■ 4.13
CMPK2-202ENST00000404168 DCAF1Q9Y4B6 1507 aa40.16■■■■■ 4.02
CMPK2-202ENST00000404168 DCAF8L2P0C7V8 631 aa40.15■■■■■ 4.02
CMPK2-202ENST00000404168 ABCC9O60706 1549 aa40.05■■■■■ 4
CMPK2-202ENST00000404168 SHROOM4Q9ULL8 1493 aa39.79■■■■□ 3.96
CMPK2-202ENST00000404168 MYO15BQ96JP2 1530 aa39.64■■■■□ 3.94
CMPK2-202ENST00000404168 NACADO15069 1562 aa39.39■■■■□ 3.9
CMPK2-202ENST00000404168 RB1CC1Q8TDY2 1594 aa39.04■■■■□ 3.84
CMPK2-202ENST00000404168 SCRIBQ14160 1630 aa39■■■■□ 3.83
CMPK2-202ENST00000404168 SUPT5HO00267 1087 aaKnown RBP38.4■■■■□ 3.74
CMPK2-202ENST00000404168 UNC13AQ9UPW8 1703 aa38.33■■■■□ 3.73
CMPK2-202ENST00000404168 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
CMPK2-202ENST00000404168 CECR2Q9BXF3 1484 aa37.85■■■■□ 3.65
CMPK2-202ENST00000404168 PABPN1Q86U42 306 aaKnown RBP eCLIP37.81■■■■□ 3.64
CMPK2-202ENST00000404168 RSF1Q96T23 1441 aaPredicted RBP37.78■■■■□ 3.64
CMPK2-202ENST00000404168 MROH2BQ7Z745 1585 aa37.62■■■■□ 3.61
CMPK2-202ENST00000404168 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.6
CMPK2-202ENST00000404168 CHIC1Q5VXU3 224 aa37.47■■■■□ 3.59
CMPK2-202ENST00000404168 SMARCA4P51532 1647 aa37.37■■■■□ 3.57
CMPK2-202ENST00000404168 WIZO95785 1651 aa37.31■■■■□ 3.56
CMPK2-202ENST00000404168 PEG3Q9GZU2 1588 aa36.89■■■■□ 3.5
CMPK2-202ENST00000404168 TOP2AP11388 1531 aaKnown RBP36.88■■■■□ 3.49
CMPK2-202ENST00000404168 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
CMPK2-202ENST00000404168 ATAD2BQ9ULI0 1458 aa36.75■■■■□ 3.47
CMPK2-202ENST00000404168 SMARCA2P51531 1590 aa36.67■■■■□ 3.46
CMPK2-202ENST00000404168 CCDC88BA6NC98 1476 aa36.54■■■■□ 3.44
CMPK2-202ENST00000404168 BAZ1BQ9UIG0 1483 aaKnown RBP36.52■■■■□ 3.44
CMPK2-202ENST00000404168 NCAPD3P42695 1498 aa36.4■■■■□ 3.42
CMPK2-202ENST00000404168 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
CMPK2-202ENST00000404168 CC2D2AQ9P2K1 1620 aa36.22■■■■□ 3.39
CMPK2-202ENST00000404168 LOC105371045A0A1W2PR82 267 aa36.18■■■■□ 3.38
CMPK2-202ENST00000404168 HRCP23327 699 aa36■■■■□ 3.35
CMPK2-202ENST00000404168 PCGF6Q9BYE7 350 aa35.94■■■■□ 3.34
CMPK2-202ENST00000404168 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
CMPK2-202ENST00000404168 ABCC8Q09428 1581 aa35.82■■■■□ 3.32
CMPK2-202ENST00000404168 CFTRP13569 1480 aa35.63■■■■□ 3.29
CMPK2-202ENST00000404168 WRNQ14191 1432 aaPredicted RBP eCLIP35.53■■■■□ 3.28
CMPK2-202ENST00000404168 TRIM26Q12899 539 aaPredicted RBP35.49■■■■□ 3.27
CMPK2-202ENST00000404168 CADPSQ9ULU8 1353 aa35.47■■■■□ 3.27
CMPK2-202ENST00000404168 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
CMPK2-202ENST00000404168 SYNJ1O43426 1573 aa35.42■■■■□ 3.26
CMPK2-202ENST00000404168 FAM9AQ8IZU1 332 aaPredicted RBP35.42■■■■□ 3.26
CMPK2-202ENST00000404168 PRDM2Q13029 1718 aa35.38■■■■□ 3.25
CMPK2-202ENST00000404168 TOP2BQ02880 1626 aa35.22■■■■□ 3.23
CMPK2-202ENST00000404168 NESP48681 1621 aa35.22■■■■□ 3.23
CMPK2-202ENST00000404168 BIVM-ERCC5R4GMW8 1640 aa35.18■■■■□ 3.22
CMPK2-202ENST00000404168 SOGA1O94964 1423 aa35.16■■■■□ 3.22
CMPK2-202ENST00000404168 CUX1P39880 1505 aa35.16■■■■□ 3.22
CMPK2-202ENST00000404168 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
CMPK2-202ENST00000404168 FANCD2Q9BXW9 1451 aa35.09■■■■□ 3.21
CMPK2-202ENST00000404168 PPARGC1BQ86YN6 1023 aaKnown RBP35.07■■■■□ 3.2
CMPK2-202ENST00000404168 RUSC2Q8N2Y8 1516 aa35.06■■■■□ 3.2
CMPK2-202ENST00000404168 EEA1Q15075 1411 aa34.98■■■■□ 3.19
CMPK2-202ENST00000404168 EHMT2Q96KQ7 1210 aa34.94■■■■□ 3.18
CMPK2-202ENST00000404168 CSRNP3Q8WYN3 585 aa34.84■■■■□ 3.17
CMPK2-202ENST00000404168 CEP164Q9UPV0 1460 aa34.84■■■■□ 3.17
CMPK2-202ENST00000404168 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
CMPK2-202ENST00000404168 DNMBPQ6XZF7 1577 aa34.77■■■■□ 3.16
CMPK2-202ENST00000404168 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
CMPK2-202ENST00000404168 KIF21AQ7Z4S6 1674 aa34.74■■■■□ 3.15
CMPK2-202ENST00000404168 TOPBP1Q92547 1522 aa34.73■■■■□ 3.15
CMPK2-202ENST00000404168 ZEB1P37275 1124 aaPredicted RBP34.71■■■■□ 3.15
CMPK2-202ENST00000404168 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
CMPK2-202ENST00000404168 KIF27Q86VH2 1401 aa34.59■■■■□ 3.13
CMPK2-202ENST00000404168 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
CMPK2-202ENST00000404168 KIF21BO75037 1637 aa34.57■■■■□ 3.12
CMPK2-202ENST00000404168 GOLGA3Q08378 1498 aa34.54■■■■□ 3.12
CMPK2-202ENST00000404168 TNIKQ9UKE5 1360 aa34.53■■■■□ 3.12
CMPK2-202ENST00000404168 CUX2O14529 1486 aa34.52■■■■□ 3.12
CMPK2-202ENST00000404168 RAD54L2Q9Y4B4 1467 aa34.5■■■■□ 3.11
CMPK2-202ENST00000404168 CEP162Q5TB80 1403 aa34.48■■■■□ 3.11
CMPK2-202ENST00000404168 RAPGEF2Q9Y4G8 1499 aa34.43■■■■□ 3.1
CMPK2-202ENST00000404168 PRXQ9BXM0 1461 aa34.42■■■■□ 3.1
CMPK2-202ENST00000404168 MRC2Q9UBG0 1479 aa34.42■■■■□ 3.1
CMPK2-202ENST00000404168 ABCA10Q8WWZ4 1543 aa34.42■■■■□ 3.1
CMPK2-202ENST00000404168 UBTFP17480 764 aaKnown RBP34.39■■■■□ 3.1
CMPK2-202ENST00000404168 IGF1RP08069 1367 aa34.34■■■■□ 3.09
CMPK2-202ENST00000404168 ERICH3Q5RHP9 1530 aa34.32■■■■□ 3.08
CMPK2-202ENST00000404168 WDR97A6NE52 1622 aa34.31■■■■□ 3.08
CMPK2-202ENST00000404168 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
CMPK2-202ENST00000404168 WDR62O43379 1518 aa34.25■■■■□ 3.07
CMPK2-202ENST00000404168 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
CMPK2-202ENST00000404168 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
CMPK2-202ENST00000404168 ABCA5Q8WWZ7 1642 aa34.15■■■■□ 3.06
CMPK2-202ENST00000404168 TDRD9Q8NDG6 1382 aaKnown RBP34.14■■■■□ 3.06
CMPK2-202ENST00000404168 CARMIL1Q5VZK9 1371 aa34.13■■■■□ 3.05
CMPK2-202ENST00000404168 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
CMPK2-202ENST00000404168 CLIP1P30622 1438 aa34.01■■■■□ 3.03
CMPK2-202ENST00000404168 IFT140Q96RY7 1462 aa33.99■■■■□ 3.03
CMPK2-202ENST00000404168 CUL7Q14999 1698 aa33.99■■■■□ 3.03
CMPK2-202ENST00000404168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.94■■■■□ 3.02
CMPK2-202ENST00000404168 AQRO60306 1485 aaKnown RBP eCLIP33.92■■■■□ 3.02
CMPK2-202ENST00000404168 ZNF608Q9ULD9 1512 aaPredicted RBP33.9■■■■□ 3.02
CMPK2-202ENST00000404168 RANGAP1P46060 587 aaPredicted RBP33.88■■■■□ 3.01
CMPK2-202ENST00000404168 CCER1Q8TC90 406 aaPredicted RBP33.87■■■■□ 3.01
CMPK2-202ENST00000404168 PBRM1Q86U86 1689 aa33.86■■■■□ 3.01
CMPK2-202ENST00000404168 TTBK1Q5TCY1 1321 aaPredicted RBP33.82■■■■□ 3
CMPK2-202ENST00000404168 VPS8Q8N3P4 1428 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms