Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA6Q8N139 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA6Q8N139 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA6Q8N139 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC36.22■■■■□ 3.39
ABCA6Q8N139 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC36.22■■■■□ 3.39
ABCA6Q8N139 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC36.22■■■■□ 3.39
ABCA6Q8N139 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC36.21■■■■□ 3.39
ABCA6Q8N139 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC36.21■■■■□ 3.39
ABCA6Q8N139 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
ABCA6Q8N139 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC36.2■■■■□ 3.38
ABCA6Q8N139 AC010997.5-201ENST00000609182 354 ntBASIC36.19■■■■□ 3.38
ABCA6Q8N139 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC36.19■■■■□ 3.38
ABCA6Q8N139 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
ABCA6Q8N139 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC36.19■■■■□ 3.38
ABCA6Q8N139 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC36.19■■■■□ 3.38
ABCA6Q8N139 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ABCA6Q8N139 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC36.18■■■■□ 3.38
ABCA6Q8N139 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC36.18■■■■□ 3.38
ABCA6Q8N139 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.18■■■■□ 3.38
ABCA6Q8N139 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA6Q8N139 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA6Q8N139 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA6Q8N139 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
ABCA6Q8N139 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC36.16■■■■□ 3.38
ABCA6Q8N139 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC36.16■■■■□ 3.38
ABCA6Q8N139 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC36.16■■■■□ 3.38
ABCA6Q8N139 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
ABCA6Q8N139 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
ABCA6Q8N139 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC36.16■■■■□ 3.38
ABCA6Q8N139 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC36.16■■■■□ 3.38
ABCA6Q8N139 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC36.15■■■■□ 3.38
ABCA6Q8N139 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC36.15■■■■□ 3.38
ABCA6Q8N139 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
ABCA6Q8N139 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC36.15■■■■□ 3.38
ABCA6Q8N139 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
ABCA6Q8N139 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
ABCA6Q8N139 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC36.15■■■■□ 3.38
ABCA6Q8N139 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC36.15■■■■□ 3.38
ABCA6Q8N139 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
ABCA6Q8N139 ZNRF2P3-201ENST00000424200 374 ntBASIC36.14■■■■□ 3.38
ABCA6Q8N139 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC36.14■■■■□ 3.38
ABCA6Q8N139 AC005837.3-201ENST00000612163 286 ntBASIC36.13■■■■□ 3.37
ABCA6Q8N139 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
ABCA6Q8N139 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC36.11■■■■□ 3.37
ABCA6Q8N139 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.11■■■■□ 3.37
ABCA6Q8N139 AC011551.1-201ENST00000614101 683 ntBASIC36.11■■■■□ 3.37
ABCA6Q8N139 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
ABCA6Q8N139 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
ABCA6Q8N139 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC36.1■■■■□ 3.37
ABCA6Q8N139 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC36.1■■■■□ 3.37
ABCA6Q8N139 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC36.09■■■■□ 3.37
ABCA6Q8N139 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.09■■■■□ 3.37
ABCA6Q8N139 EXOG-217ENST00000630638 197 ntTSL 5 BASIC36.09■■■■□ 3.37
ABCA6Q8N139 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC36.09■■■■□ 3.37
ABCA6Q8N139 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC36.09■■■■□ 3.37
ABCA6Q8N139 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC36.08■■■■□ 3.37
ABCA6Q8N139 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA6Q8N139 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA6Q8N139 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC36.08■■■■□ 3.37
ABCA6Q8N139 AC133561.4-201ENST00000566112 224 ntBASIC36.08■■■■□ 3.37
ABCA6Q8N139 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
ABCA6Q8N139 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC36.07■■■■□ 3.36
ABCA6Q8N139 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC36.06■■■■□ 3.36
ABCA6Q8N139 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
ABCA6Q8N139 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
ABCA6Q8N139 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
ABCA6Q8N139 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC36.05■■■■□ 3.36
ABCA6Q8N139 AC026271.2-201ENST00000428091 497 ntBASIC36.05■■■■□ 3.36
ABCA6Q8N139 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC36.05■■■■□ 3.36
ABCA6Q8N139 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
ABCA6Q8N139 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
ABCA6Q8N139 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.04■■■■□ 3.36
ABCA6Q8N139 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC36.04■■■■□ 3.36
ABCA6Q8N139 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
ABCA6Q8N139 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
ABCA6Q8N139 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.02■■■■□ 3.36
ABCA6Q8N139 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC36.02■■■■□ 3.36
ABCA6Q8N139 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC36.01■■■■□ 3.35
ABCA6Q8N139 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC36.01■■■■□ 3.35
ABCA6Q8N139 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.35
ABCA6Q8N139 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
ABCA6Q8N139 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC36.01■■■■□ 3.35
ABCA6Q8N139 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.01■■■■□ 3.35
ABCA6Q8N139 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
ABCA6Q8N139 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC36■■■■□ 3.35
ABCA6Q8N139 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC36■■■■□ 3.35
ABCA6Q8N139 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC36■■■■□ 3.35
ABCA6Q8N139 CD72-202ENST00000378430 585 ntTSL 3 BASIC35.99■■■■□ 3.35
ABCA6Q8N139 AL356740.2-201ENST00000601559 647 ntBASIC35.99■■■■□ 3.35
ABCA6Q8N139 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
ABCA6Q8N139 EBPL-204ENST00000378272 766 ntTSL 3 BASIC35.98■■■■□ 3.35
ABCA6Q8N139 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
ABCA6Q8N139 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC35.98■■■■□ 3.35
ABCA6Q8N139 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC35.98■■■■□ 3.35
ABCA6Q8N139 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms