Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 KRT18P10-201ENST00000388836 1287 ntBASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 BX664725.1-201ENST00000438252 379 ntBASIC20.63■□□□□ 0.89
RAI1Q7Z5J4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.62■□□□□ 0.89
RAI1Q7Z5J4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RAI1Q7Z5J4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAI1Q7Z5J4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 UNC93B8-201ENST00000511903 705 ntBASIC20.59■□□□□ 0.89
RAI1Q7Z5J4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAI1Q7Z5J4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAI1Q7Z5J4 MIR4787-201ENST00000607364 84 ntBASIC20.58■□□□□ 0.88
RAI1Q7Z5J4 AC142472.1-201ENST00000612013 1741 ntBASIC20.58■□□□□ 0.88
RAI1Q7Z5J4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAI1Q7Z5J4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 KRT16P3-201ENST00000439127 1283 ntBASIC20.57■□□□□ 0.88
RAI1Q7Z5J4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.56■□□□□ 0.88
RAI1Q7Z5J4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 KRT18P24-201ENST00000344739 1156 ntBASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 MIR4281-201ENST00000580852 62 ntBASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAI1Q7Z5J4 AP004609.3-201ENST00000610705 1884 ntBASIC20.54■□□□□ 0.88
RAI1Q7Z5J4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAI1Q7Z5J4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAI1Q7Z5J4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.54■□□□□ 0.88
RAI1Q7Z5J4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAI1Q7Z5J4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 AC137630.3-201ENST00000607245 391 ntBASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 KRT125P-201ENST00000546827 989 ntBASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAI1Q7Z5J4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAI1Q7Z5J4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAI1Q7Z5J4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.52■□□□□ 0.87
RAI1Q7Z5J4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.51■□□□□ 0.87
RAI1Q7Z5J4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.51■□□□□ 0.87
RAI1Q7Z5J4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI1Q7Z5J4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAI1Q7Z5J4 AC131281.2-201ENST00000520478 145 ntBASIC20.51■□□□□ 0.87
RAI1Q7Z5J4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAI1Q7Z5J4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms