Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TUBA1AQ71U36 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.83■■□□□ 1.09
TUBA1AQ71U36 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
TUBA1AQ71U36 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 AC138932.3-201ENST00000567634 1902 ntBASIC21.81■■□□□ 1.08
TUBA1AQ71U36 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TUBA1AQ71U36 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TUBA1AQ71U36 AC022211.4-201ENST00000625094 2161 ntBASIC21.8■■□□□ 1.08
TUBA1AQ71U36 AC068473.5-201ENST00000616428 2072 ntBASIC21.79■■□□□ 1.08
TUBA1AQ71U36 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 AC022413.1-201ENST00000624602 984 ntBASIC21.79■■□□□ 1.08
TUBA1AQ71U36 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TUBA1AQ71U36 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TUBA1AQ71U36 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 GPX1-201ENST00000419349 1106 ntBASIC21.77■■□□□ 1.08
TUBA1AQ71U36 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TUBA1AQ71U36 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 AL359258.2-201ENST00000564063 1566 ntBASIC21.76■■□□□ 1.07
TUBA1AQ71U36 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 HSD17B1P1-201ENST00000590052 955 ntBASIC21.76■■□□□ 1.07
TUBA1AQ71U36 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBA1AQ71U36 AC010501.1-201ENST00000606270 1962 ntBASIC21.76■■□□□ 1.07
TUBA1AQ71U36 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.75■■□□□ 1.07
TUBA1AQ71U36 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 AC060814.1-201ENST00000554326 538 ntBASIC21.74■■□□□ 1.07
TUBA1AQ71U36 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBA1AQ71U36 AC142472.1-201ENST00000612013 1741 ntBASIC21.73■■□□□ 1.07
TUBA1AQ71U36 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TUBA1AQ71U36 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBA1AQ71U36 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBA1AQ71U36 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBA1AQ71U36 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBA1AQ71U36 WHAMMP3-201ENST00000611636 1609 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms