Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PTCH2Q9Y6C5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 MIR3621-201ENST00000580529 85 ntBASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 ZNRF2P3-201ENST00000424200 374 ntBASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 AC133561.4-201ENST00000566112 224 ntBASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 MIR4466-201ENST00000606121 54 ntBASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 AC010997.5-201ENST00000609182 354 ntBASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-1-201ENST00000616420 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-2-201ENST00000616483 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-4-201ENST00000617390 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-3-201ENST00000622482 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTCH2Q9Y6C5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCH2Q9Y6C5 AC026271.2-201ENST00000428091 497 ntBASIC27.55■■■□□ 2
PTCH2Q9Y6C5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KRT18P10-201ENST00000388836 1287 ntBASIC27.54■■■□□ 2
PTCH2Q9Y6C5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 AL356740.2-201ENST00000601559 647 ntBASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PTCH2Q9Y6C5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.52■■■□□ 2
PTCH2Q9Y6C5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 AL139393.2-201ENST00000608721 2025 ntBASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 AC104564.3-201ENST00000582367 638 ntBASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 MTDHP2-201ENST00000601468 714 ntBASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 MIR4281-201ENST00000580852 62 ntBASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 AL512631.2-201ENST00000604634 923 ntBASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms