Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPS28Q9Y2Q9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MRPS28Q9Y2Q9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPS28Q9Y2Q9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPS28Q9Y2Q9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MRPS28Q9Y2Q9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPS28Q9Y2Q9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.58■□□□□ 0.89
MRPS28Q9Y2Q9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPS28Q9Y2Q9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.57■□□□□ 0.88
MRPS28Q9Y2Q9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 ZNRF2P2-203ENST00000454624 420 ntBASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MRPS28Q9Y2Q9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MRPS28Q9Y2Q9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 AC126177.7-201ENST00000547904 679 ntBASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MRPS28Q9Y2Q9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRPS28Q9Y2Q9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.52■□□□□ 0.88
MRPS28Q9Y2Q9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRPS28Q9Y2Q9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRPS28Q9Y2Q9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.52■□□□□ 0.88
MRPS28Q9Y2Q9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRPS28Q9Y2Q9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRPS28Q9Y2Q9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRPS28Q9Y2Q9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.5■□□□□ 0.87
MRPS28Q9Y2Q9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.5■□□□□ 0.87
MRPS28Q9Y2Q9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPS28Q9Y2Q9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRPS28Q9Y2Q9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 AC097639.1-201ENST00000565519 1891 ntBASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MRPS28Q9Y2Q9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPS28Q9Y2Q9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MRPS28Q9Y2Q9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MRPS28Q9Y2Q9 CR559946.2-201ENST00000623684 991 ntBASIC20.48■□□□□ 0.87
MRPS28Q9Y2Q9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.48■□□□□ 0.87
MRPS28Q9Y2Q9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MRPS28Q9Y2Q9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms