Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.36■■□□□ 1.65
CALR3Q96L12 CR559946.2-201ENST00000623684 991 ntBASIC25.36■■□□□ 1.65
CALR3Q96L12 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.36■■□□□ 1.65
CALR3Q96L12 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.36■■□□□ 1.65
CALR3Q96L12 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CALR3Q96L12 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.35■■□□□ 1.65
CALR3Q96L12 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CALR3Q96L12 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
CALR3Q96L12 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.35■■□□□ 1.65
CALR3Q96L12 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.35■■□□□ 1.65
CALR3Q96L12 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
CALR3Q96L12 AC138932.3-201ENST00000567634 1902 ntBASIC25.35■■□□□ 1.65
CALR3Q96L12 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.35■■□□□ 1.65
CALR3Q96L12 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.34■■□□□ 1.65
CALR3Q96L12 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CALR3Q96L12 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CALR3Q96L12 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CALR3Q96L12 AC097639.1-201ENST00000565519 1891 ntBASIC25.34■■□□□ 1.65
CALR3Q96L12 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CALR3Q96L12 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CALR3Q96L12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CALR3Q96L12 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CALR3Q96L12 AP003733.4-201ENST00000623785 1697 ntBASIC25.32■■□□□ 1.64
CALR3Q96L12 AL139125.2-201ENST00000623134 1869 ntBASIC25.32■■□□□ 1.64
CALR3Q96L12 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
CALR3Q96L12 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CALR3Q96L12 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CALR3Q96L12 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CALR3Q96L12 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CALR3Q96L12 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.31■■□□□ 1.64
CALR3Q96L12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
CALR3Q96L12 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CALR3Q96L12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CALR3Q96L12 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.3■■□□□ 1.64
CALR3Q96L12 MIR3648-2-201ENST00000581792 180 ntBASIC25.3■■□□□ 1.64
CALR3Q96L12 MIR3648-1-201ENST00000615959 180 ntBASIC25.3■■□□□ 1.64
CALR3Q96L12 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CALR3Q96L12 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CALR3Q96L12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CALR3Q96L12 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.29■■□□□ 1.64
CALR3Q96L12 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.29■■□□□ 1.64
CALR3Q96L12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CALR3Q96L12 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CALR3Q96L12 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CALR3Q96L12 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.29■■□□□ 1.64
CALR3Q96L12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CALR3Q96L12 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CALR3Q96L12 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CALR3Q96L12 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CALR3Q96L12 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.28■■□□□ 1.64
CALR3Q96L12 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.28■■□□□ 1.64
CALR3Q96L12 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CALR3Q96L12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CALR3Q96L12 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CALR3Q96L12 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CALR3Q96L12 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CALR3Q96L12 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CALR3Q96L12 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.26■■□□□ 1.63
CALR3Q96L12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CALR3Q96L12 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CALR3Q96L12 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.26■■□□□ 1.63
CALR3Q96L12 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CALR3Q96L12 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CALR3Q96L12 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.26■■□□□ 1.63
CALR3Q96L12 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CALR3Q96L12 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CALR3Q96L12 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CALR3Q96L12 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.25■■□□□ 1.63
CALR3Q96L12 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.25■■□□□ 1.63
CALR3Q96L12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CALR3Q96L12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CALR3Q96L12 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.24■■□□□ 1.63
CALR3Q96L12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CALR3Q96L12 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CALR3Q96L12 ABHD17AP4-201ENST00000411545 909 ntBASIC25.24■■□□□ 1.63
CALR3Q96L12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.24■■□□□ 1.63
CALR3Q96L12 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CALR3Q96L12 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CALR3Q96L12 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.23■■□□□ 1.63
CALR3Q96L12 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CALR3Q96L12 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CALR3Q96L12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CALR3Q96L12 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CALR3Q96L12 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CALR3Q96L12 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CALR3Q96L12 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CALR3Q96L12 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.22■■□□□ 1.63
CALR3Q96L12 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.22■■□□□ 1.63
CALR3Q96L12 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CALR3Q96L12 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.21■■□□□ 1.63
CALR3Q96L12 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CALR3Q96L12 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms