Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC36.77■■■■□ 3.48
AFAP1Q8N556 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
AFAP1Q8N556 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC36.77■■■■□ 3.48
AFAP1Q8N556 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
AFAP1Q8N556 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
AFAP1Q8N556 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC36.75■■■■□ 3.47
AFAP1Q8N556 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC36.75■■■■□ 3.47
AFAP1Q8N556 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC36.75■■■■□ 3.47
AFAP1Q8N556 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC36.75■■■■□ 3.47
AFAP1Q8N556 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
AFAP1Q8N556 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC36.74■■■■□ 3.47
AFAP1Q8N556 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC36.74■■■■□ 3.47
AFAP1Q8N556 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC36.74■■■■□ 3.47
AFAP1Q8N556 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
AFAP1Q8N556 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC36.74■■■■□ 3.47
AFAP1Q8N556 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
AFAP1Q8N556 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC36.74■■■■□ 3.47
AFAP1Q8N556 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC36.73■■■■□ 3.47
AFAP1Q8N556 RPP21-222ENST00000433076 577 ntTSL 2 BASIC36.73■■■■□ 3.47
AFAP1Q8N556 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC36.73■■■■□ 3.47
AFAP1Q8N556 AC092028.1-203ENST00000608262 953 ntBASIC36.72■■■■□ 3.47
AFAP1Q8N556 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC36.71■■■■□ 3.47
AFAP1Q8N556 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
AFAP1Q8N556 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
AFAP1Q8N556 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC36.71■■■■□ 3.47
AFAP1Q8N556 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC36.71■■■■□ 3.47
AFAP1Q8N556 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
AFAP1Q8N556 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
AFAP1Q8N556 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
AFAP1Q8N556 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC36.69■■■■□ 3.46
AFAP1Q8N556 SRR-208ENST00000576848 588 ntTSL 4 BASIC36.69■■■■□ 3.46
AFAP1Q8N556 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC36.69■■■■□ 3.46
AFAP1Q8N556 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
AFAP1Q8N556 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC36.68■■■■□ 3.46
AFAP1Q8N556 KRT18P10-201ENST00000388836 1287 ntBASIC36.68■■■■□ 3.46
AFAP1Q8N556 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC36.68■■■■□ 3.46
AFAP1Q8N556 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
AFAP1Q8N556 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC36.68■■■■□ 3.46
AFAP1Q8N556 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
AFAP1Q8N556 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
AFAP1Q8N556 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
AFAP1Q8N556 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC36.67■■■■□ 3.46
AFAP1Q8N556 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC36.67■■■■□ 3.46
AFAP1Q8N556 AC110285.6-201ENST00000617652 491 ntBASIC36.67■■■■□ 3.46
AFAP1Q8N556 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC36.66■■■■□ 3.46
AFAP1Q8N556 PROC-203ENST00000409048 1586 ntTSL 5 BASIC36.66■■■■□ 3.46
AFAP1Q8N556 AL136116.3-201ENST00000402907 1138 ntBASIC36.66■■■■□ 3.46
AFAP1Q8N556 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
AFAP1Q8N556 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC36.65■■■■□ 3.46
AFAP1Q8N556 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
AFAP1Q8N556 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC36.65■■■■□ 3.46
AFAP1Q8N556 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
AFAP1Q8N556 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
AFAP1Q8N556 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC36.65■■■■□ 3.46
AFAP1Q8N556 AL449106.1-201ENST00000608517 1980 ntBASIC36.65■■■■□ 3.46
AFAP1Q8N556 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC36.65■■■■□ 3.46
AFAP1Q8N556 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC36.64■■■■□ 3.46
AFAP1Q8N556 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC36.63■■■■□ 3.46
AFAP1Q8N556 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC36.63■■■■□ 3.45
AFAP1Q8N556 AL117332.1-201ENST00000622628 974 ntBASIC36.62■■■■□ 3.45
AFAP1Q8N556 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC36.62■■■■□ 3.45
AFAP1Q8N556 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC36.61■■■■□ 3.45
AFAP1Q8N556 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC36.61■■■■□ 3.45
AFAP1Q8N556 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC36.61■■■■□ 3.45
AFAP1Q8N556 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC36.61■■■■□ 3.45
AFAP1Q8N556 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC36.61■■■■□ 3.45
AFAP1Q8N556 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
AFAP1Q8N556 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
AFAP1Q8N556 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC36.6■■■■□ 3.45
AFAP1Q8N556 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC36.6■■■■□ 3.45
AFAP1Q8N556 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
AFAP1Q8N556 ABCB10P1-201ENST00000614297 2181 ntBASIC36.6■■■■□ 3.45
AFAP1Q8N556 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.59■■■■□ 3.45
AFAP1Q8N556 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC36.58■■■■□ 3.45
AFAP1Q8N556 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
AFAP1Q8N556 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC36.57■■■■□ 3.45
AFAP1Q8N556 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC36.57■■■■□ 3.44
AFAP1Q8N556 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC36.57■■■■□ 3.44
AFAP1Q8N556 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC36.57■■■■□ 3.44
AFAP1Q8N556 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
AFAP1Q8N556 MIR3621-201ENST00000580529 85 ntBASIC36.56■■■■□ 3.44
AFAP1Q8N556 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC36.55■■■■□ 3.44
AFAP1Q8N556 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
AFAP1Q8N556 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC36.55■■■■□ 3.44
AFAP1Q8N556 AC005837.3-201ENST00000612163 286 ntBASIC36.55■■■■□ 3.44
AFAP1Q8N556 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC36.55■■■■□ 3.44
AFAP1Q8N556 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
AFAP1Q8N556 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
AFAP1Q8N556 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC36.54■■■■□ 3.44
AFAP1Q8N556 MIR4281-201ENST00000580852 62 ntBASIC36.54■■■■□ 3.44
AFAP1Q8N556 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC36.54■■■■□ 3.44
AFAP1Q8N556 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
AFAP1Q8N556 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC36.53■■■■□ 3.44
AFAP1Q8N556 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC36.53■■■■□ 3.44
AFAP1Q8N556 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC36.53■■■■□ 3.44
AFAP1Q8N556 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC36.53■■■■□ 3.44
AFAP1Q8N556 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
AFAP1Q8N556 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC36.52■■■■□ 3.44
AFAP1Q8N556 MIR4466-201ENST00000606121 54 ntBASIC36.52■■■■□ 3.44
AFAP1Q8N556 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms