Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 SMPD5-203ENST00000639008 1464 ntBASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VMA21Q3ZAQ7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VMA21Q3ZAQ7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 AC092296.2-201ENST00000589470 999 ntBASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VMA21Q3ZAQ7 AC096887.2-201ENST00000623443 1957 ntBASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 ECEL1P2-201ENST00000461596 1295 ntBASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
VMA21Q3ZAQ7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.29■□□□□ 0.68
VMA21Q3ZAQ7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VMA21Q3ZAQ7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VMA21Q3ZAQ7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VMA21Q3ZAQ7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
VMA21Q3ZAQ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VMA21Q3ZAQ7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 MIR4449-201ENST00000578365 66 ntBASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VMA21Q3ZAQ7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
VMA21Q3ZAQ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VMA21Q3ZAQ7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VMA21Q3ZAQ7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VMA21Q3ZAQ7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VMA21Q3ZAQ7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.25■□□□□ 0.67
VMA21Q3ZAQ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.25■□□□□ 0.67
VMA21Q3ZAQ7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.25■□□□□ 0.67
VMA21Q3ZAQ7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VMA21Q3ZAQ7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 RP9P-202ENST00000450133 1212 ntBASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VMA21Q3ZAQ7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VMA21Q3ZAQ7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VMA21Q3ZAQ7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms