Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 ATP5A1-204ENST00000586523 4547 nt7.28□□□□□ -1.247e-12■■■■■ 35.4
U2AF2P26368 GABRE-207ENST00000476016 813 ntTSL 49.48□□□□□ -0.895e-7■■■■■ 35.4
U2AF2P26368 SFSWAP-207ENST00000538548 2636 ntTSL 522.32■■□□□ 1.165e-9■■■■■ 35.4
U2AF2P26368 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)20.05■□□□□ 0.85e-9■■■■■ 35.4
U2AF2P26368 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.325e-9■■■■■ 35.4
U2AF2P26368 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.315e-9■■■■■ 35.4
U2AF2P26368 GSE1-209ENST00000479488 649 ntTSL 217.42■□□□□ 0.381e-12■■■■■ 35.3
U2AF2P26368 GSE1-205ENST00000412692 6625 ntTSL 517.14■□□□□ 0.331e-12■■■■■ 35.3
U2AF2P26368 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.111e-12■■■■■ 35.3
U2AF2P26368 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.011e-12■■■■■ 35.3
U2AF2P26368 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.121e-12■■■■■ 35.3
U2AF2P26368 GSE1-207ENST00000469381 5885 ntTSL 213.04□□□□□ -0.321e-12■■■■■ 35.3
U2AF2P26368 MIR223-201ENST00000385204 110 ntBASIC5.76□□□□□ -1.495e-21■■■■■ 35.3
U2AF2P26368 LEMD2-202ENST00000421671 2323 ntTSL 325.54■■□□□ 1.683e-14■■■■■ 35.3
U2AF2P26368 LEMD2-203ENST00000442696 839 ntTSL 525■■□□□ 1.593e-14■■■■■ 35.3
U2AF2P26368 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.213e-14■■■■■ 35.3
U2AF2P26368 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.133e-14■■■■■ 35.3
U2AF2P26368 LEMD2-213ENST00000514636 544 ntTSL 315.86■□□□□ 0.133e-14■■■■■ 35.3
U2AF2P26368 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC13.93□□□□□ -0.183e-14■■■■■ 35.3
U2AF2P26368 LEMD2-211ENST00000513701 555 ntTSL 49.74□□□□□ -0.853e-14■■■■■ 35.3
U2AF2P26368 LEMD2-210ENST00000512368 544 ntTSL 48.1□□□□□ -1.113e-14■■■■■ 35.3
U2AF2P26368 XIST-211ENST00000635841 1734 ntTSL 5 BASIC10.17□□□□□ -0.782e-22■■■■■ 35.3
U2AF2P26368 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.04□□□□□ -0.82e-22■■■■■ 35.3
U2AF2P26368 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.33□□□□□ -1.42e-22■■■■■ 35.3
U2AF2P26368 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.75□□□□□ -1.492e-22■■■■■ 35.3
U2AF2P26368 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17■□□□□ 0.313e-7■■■■■ 35.3
U2AF2P26368 CGGBP1-205ENST00000474441 717 ntTSL 22.95□□□□□ -1.945e-12■■■■■ 35.3
U2AF2P26368 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.862e-10■■■■■ 35.2
U2AF2P26368 LRIG2-205ENST00000492207 5076 ntTSL 57.7□□□□□ -1.182e-10■■■■■ 35.2
U2AF2P26368 LRIG2-203ENST00000466161 3366 ntTSL 26.94□□□□□ -1.32e-10■■■■■ 35.2
U2AF2P26368 LRIG2-202ENST00000466069 564 ntTSL 22.87□□□□□ -1.952e-10■■■■■ 35.2
U2AF2P26368 SECISBP2L-202ENST00000380927 2551 ntTSL 1 (best)16.45■□□□□ 0.223e-8■■■■■ 35.1
U2AF2P26368 SECISBP2L-208ENST00000559424 1084 ntTSL 1 (best)15.97■□□□□ 0.153e-8■■■■■ 35.1
U2AF2P26368 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.773e-8■■■■■ 35.1
U2AF2P26368 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.93e-8■■■■■ 35.1
U2AF2P26368 CALR-205ENST00000587486 957 ntTSL 218.8■□□□□ 0.61e-6■■■■■ 35.1
U2AF2P26368 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.51e-6■■■■■ 35.1
U2AF2P26368 CALR-207ENST00000590325 781 ntTSL 216.24■□□□□ 0.191e-6■■■■■ 35.1
U2AF2P26368 CALR-206ENST00000588454 776 ntTSL 311.97□□□□□ -0.491e-6■■■■■ 35.1
U2AF2P26368 KRTCAP2-206ENST00000487350 785 ntTSL 1 (best)24.33■■□□□ 1.497e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.67e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-205ENST00000482246 414 ntTSL 317.26■□□□□ 0.357e-8■■■■■ 35.1
U2AF2P26368 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.167e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-207ENST00000490672 3264 ntTSL 214.81□□□□□ -0.047e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-204ENST00000471891 578 ntTSL 314.31□□□□□ -0.127e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-209ENST00000492892 430 ntTSL 313.22□□□□□ -0.297e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-210ENST00000497317 477 ntTSL 313.09□□□□□ -0.317e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-208ENST00000491084 598 ntTSL 312.18□□□□□ -0.467e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-203ENST00000463527 463 ntTSL 34.7□□□□□ -1.667e-8■■■■■ 35.1
U2AF2P26368 KRTCAP2-202ENST00000461136 271 ntTSL 34.7□□□□□ -1.667e-8■■■■■ 35.1
U2AF2P26368 CCSER2-208ENST00000494586 474 ntTSL 210.5□□□□□ -0.731e-18■■■■■ 35.1
U2AF2P26368 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.661e-21■■■■■ 35.1
U2AF2P26368 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC12.88□□□□□ -0.351e-21■■■■■ 35.1
U2AF2P26368 RB1CC1-208ENST00000521611 528 ntTSL 524.46■■□□□ 1.512e-7■■■■■ 35.1
U2AF2P26368 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.492e-7■■■■■ 35.1
U2AF2P26368 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.342e-7■■■■■ 35.1
U2AF2P26368 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC14.46□□□□□ -0.092e-6■■■■■ 35
U2AF2P26368 PATJ-208ENST00000484937 4990 ntTSL 59.98□□□□□ -0.812e-6■■■■■ 35
U2AF2P26368 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.22e-6■■■■■ 35
U2AF2P26368 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.59□□□□□ -1.512e-6■■■■■ 35
U2AF2P26368 HMGN1-217ENST00000489072 1014 ntTSL 327.91■■■□□ 2.068e-8■■■■■ 35
U2AF2P26368 HMGN1-206ENST00000431390 1552 ntTSL 321■□□□□ 0.958e-8■■■■■ 35
U2AF2P26368 HMGN1-207ENST00000436324 1045 ntTSL 220.41■□□□□ 0.868e-8■■■■■ 35
U2AF2P26368 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.638e-8■■■■■ 35
U2AF2P26368 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.88■□□□□ 0.618e-8■■■■■ 35
U2AF2P26368 HMGN1-210ENST00000464078 508 ntTSL 518.86■□□□□ 0.618e-8■■■■■ 35
U2AF2P26368 HMGN1-208ENST00000443046 823 ntTSL 315.58■□□□□ 0.088e-8■■■■■ 35
U2AF2P26368 HMGN1-216ENST00000486741 4299 ntTSL 214.85□□□□□ -0.038e-8■■■■■ 35
U2AF2P26368 HMGN1-220ENST00000492280 2707 ntTSL 514.36□□□□□ -0.118e-8■■■■■ 35
U2AF2P26368 HMGN1-213ENST00000482192 793 ntTSL 313.29□□□□□ -0.288e-8■■■■■ 35
U2AF2P26368 HMGN1-215ENST00000485550 745 ntTSL 511.63□□□□□ -0.558e-8■■■■■ 35
U2AF2P26368 HMGN1-201ENST00000288344 1303 ntTSL 210.39□□□□□ -0.758e-8■■■■■ 35
U2AF2P26368 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC10.37□□□□□ -0.758e-8■■■■■ 35
U2AF2P26368 HMGN1-205ENST00000419378 850 ntTSL 27.71□□□□□ -1.188e-8■■■■■ 35
U2AF2P26368 HMGN1-218ENST00000490032 405 ntTSL 31.88□□□□□ -2.118e-8■■■■■ 35
U2AF2P26368 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.731e-7■■■■■ 34.9
U2AF2P26368 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.491e-7■■■■■ 34.9
U2AF2P26368 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.211e-7■■■■■ 34.9
U2AF2P26368 SSBP1-206ENST00000467681 630 ntTSL 215.42■□□□□ 0.061e-7■■■■■ 34.9
U2AF2P26368 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.491e-7■■■■■ 34.9
U2AF2P26368 SSBP1-208ENST00000469123 662 ntTSL 59.68□□□□□ -0.861e-7■■■■■ 34.9
U2AF2P26368 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.241e-7■■■■■ 34.9
U2AF2P26368 SSBP1-204ENST00000465167 517 ntTSL 56.29□□□□□ -1.41e-7■■■■■ 34.9
U2AF2P26368 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.551e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-225ENST00000636808 2639 ntTSL 522.63■■□□□ 1.216e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.3■■□□□ 1.166e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.126e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.076e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-220ENST00000636190 1357 ntTSL 515.49■□□□□ 0.076e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-217ENST00000635858 887 ntTSL 515.12■□□□□ 0.016e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-211ENST00000509270 608 ntTSL 515□□□□□ -0.016e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-226ENST00000636872 2747 ntTSL 514.88□□□□□ -0.036e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC14.78□□□□□ -0.046e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-210ENST00000503281 937 ntTSL 514.38□□□□□ -0.116e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC14.24□□□□□ -0.136e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-235ENST00000637964 1065 ntTSL 514.24□□□□□ -0.136e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-221ENST00000636225 1738 ntTSL 513.7□□□□□ -0.226e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-205ENST00000458249 2037 ntTSL 513.18□□□□□ -0.36e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC13.1□□□□□ -0.316e-7■■■■■ 34.9
U2AF2P26368 ALDH7A1-219ENST00000636062 1809 ntTSL 512.87□□□□□ -0.356e-7■■■■■ 34.9
Retrieved 100 of 36,523 protein–RNA pairs in 477.2 ms