RNA–Protein interactions for RNA: ENST00000602863.1

XIST-210, X inactive specific transcript, humanhuman

TSL 3 BASIC

Gene XIST, Length 775 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-210ENST00000602863 AEBP2Q6ZN18 517 aaPredicted RBP18■□□□□ 0.47
XIST-210ENST00000602863 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
XIST-210ENST00000602863 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
XIST-210ENST00000602863 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
XIST-210ENST00000602863 PLPPR3Q6T4P5 718 aa14.79□□□□□ -0.04
XIST-210ENST00000602863 FOXD1Q16676 465 aa14.21□□□□□ -0.13
XIST-210ENST00000602863 ADRA2BP18089 450 aa13.85□□□□□ -0.19
XIST-210ENST00000602863 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
XIST-210ENST00000602863 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
XIST-210ENST00000602863 MSH5O43196 834 aa13.36□□□□□ -0.27
XIST-210ENST00000602863 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
XIST-210ENST00000602863 KCNA4P22459 653 aa13.19□□□□□ -0.3
XIST-210ENST00000602863 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
XIST-210ENST00000602863 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
XIST-210ENST00000602863 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
XIST-210ENST00000602863 EHMT2Q96KQ7 1210 aa12.72□□□□□ -0.37
XIST-210ENST00000602863 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
XIST-210ENST00000602863 SLC4A1APQ9BWU0 796 aaKnown RBP12.65□□□□□ -0.38
XIST-210ENST00000602863 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
XIST-210ENST00000602863 NISCHQ9Y2I1 1504 aa12.5□□□□□ -0.41
XIST-210ENST00000602863 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
XIST-210ENST00000602863 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
XIST-210ENST00000602863 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
XIST-210ENST00000602863 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
XIST-210ENST00000602863 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
XIST-210ENST00000602863 ZBTB22O15209 634 aa12.14□□□□□ -0.47
XIST-210ENST00000602863 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
XIST-210ENST00000602863 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
XIST-210ENST00000602863 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
XIST-210ENST00000602863 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
XIST-210ENST00000602863 DCAF8L1A6NGE4 600 aa11.68□□□□□ -0.54
XIST-210ENST00000602863 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
XIST-210ENST00000602863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.562e-8■□□□□ 11.2
XIST-210ENST00000602863 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
XIST-210ENST00000602863 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
XIST-210ENST00000602863 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
XIST-210ENST00000602863 SAMD1Q6SPF0 538 aaPredicted RBP11.41□□□□□ -0.58
XIST-210ENST00000602863 U3KPZ7 1027 aaPredicted RBP11.4□□□□□ -0.58
XIST-210ENST00000602863 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
XIST-210ENST00000602863 ATF5Q9Y2D1 282 aaPredicted RBP11.31□□□□□ -0.6
XIST-210ENST00000602863 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
XIST-210ENST00000602863 APLP2Q06481 763 aa11.25□□□□□ -0.61
XIST-210ENST00000602863 FKBP8Q14318 412 aa11.18□□□□□ -0.62
XIST-210ENST00000602863 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
XIST-210ENST00000602863 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
XIST-210ENST00000602863 TRHP20396 242 aaPredicted RBP10.96□□□□□ -0.65
XIST-210ENST00000602863 CAPN15O75808 1086 aa10.92□□□□□ -0.66
XIST-210ENST00000602863 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
XIST-210ENST00000602863 FBLN2P98095 1184 aa10.87□□□□□ -0.67
XIST-210ENST00000602863 POLA2Q14181 598 aa10.86□□□□□ -0.67
XIST-210ENST00000602863 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
XIST-210ENST00000602863 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
XIST-210ENST00000602863 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
XIST-210ENST00000602863 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
XIST-210ENST00000602863 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
XIST-210ENST00000602863 ABCB7O75027 752 aa10.74□□□□□ -0.69
XIST-210ENST00000602863 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
XIST-210ENST00000602863 PROM2Q8N271 834 aa10.7□□□□□ -0.7
XIST-210ENST00000602863 DSG3P32926 999 aa10.67□□□□□ -0.7
XIST-210ENST00000602863 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
XIST-210ENST00000602863 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
XIST-210ENST00000602863 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
XIST-210ENST00000602863 SPDYE2Q495Y8 402 aa10.49□□□□□ -0.73
XIST-210ENST00000602863 OSCARQ8IYS5 282 aa10.49□□□□□ -0.73
XIST-210ENST00000602863 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
XIST-210ENST00000602863 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
XIST-210ENST00000602863 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
XIST-210ENST00000602863 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
XIST-210ENST00000602863 DCAF1Q9Y4B6 1507 aa10.4□□□□□ -0.74
XIST-210ENST00000602863 IFNLR1Q8IU57 520 aaPredicted RBP10.4□□□□□ -0.74
XIST-210ENST00000602863 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
XIST-210ENST00000602863 STAG3Q9UJ98 1225 aa10.36□□□□□ -0.75
XIST-210ENST00000602863 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
XIST-210ENST00000602863 ABCC9O60706 1549 aa10.33□□□□□ -0.76
XIST-210ENST00000602863 POTEHQ6S545 545 aa10.33□□□□□ -0.76
XIST-210ENST00000602863 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
XIST-210ENST00000602863 RBM42Q9BTD8 480 aaKnown RBP10.28□□□□□ -0.76
XIST-210ENST00000602863 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
XIST-210ENST00000602863 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
XIST-210ENST00000602863 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
XIST-210ENST00000602863 NACADO15069 1562 aa10.22□□□□□ -0.77
XIST-210ENST00000602863 MIER1Q8N108 512 aa10.21□□□□□ -0.77
XIST-210ENST00000602863 PKD2Q13563 968 aa10.2□□□□□ -0.78
XIST-210ENST00000602863 PLEKHG5O94827 1062 aa10.18□□□□□ -0.78
XIST-210ENST00000602863 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
XIST-210ENST00000602863 RB1CC1Q8TDY2 1594 aa10.11□□□□□ -0.79
XIST-210ENST00000602863 AKT1S1Q96B36 256 aa10.11□□□□□ -0.79
XIST-210ENST00000602863 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
XIST-210ENST00000602863 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
XIST-210ENST00000602863 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
XIST-210ENST00000602863 SHROOM4Q9ULL8 1493 aa10.03□□□□□ -0.8
XIST-210ENST00000602863 CIZ1Q9ULV3 898 aaPredicted RBP10.01□□□□□ -0.81
XIST-210ENST00000602863 REM2Q8IYK8 340 aaPredicted RBP10□□□□□ -0.81
XIST-210ENST00000602863 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
XIST-210ENST00000602863 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
XIST-210ENST00000602863 TRIM41Q8WV44 630 aa9.97□□□□□ -0.81
XIST-210ENST00000602863 RGL2O15211 777 aa9.96□□□□□ -0.82
XIST-210ENST00000602863 GSE1Q14687 1217 aa9.93□□□□□ -0.82
XIST-210ENST00000602863 BBXQ8WY36 941 aaPredicted RBP9.92□□□□□ -0.82
XIST-210ENST00000602863 CREBZFQ9NS37 354 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms