RNA–Protein interactions for RNA: ENST00000614475.4

LEMD2-214, Transcript of LEM domain containing 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LEMD2, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-214ENST00000614475 NISCHQ9Y2I1 1504 aa37.28■■■■□ 3.56
LEMD2-214ENST00000614475 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
LEMD2-214ENST00000614475 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.69
LEMD2-214ENST00000614475 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
LEMD2-214ENST00000614475 SUPT5HO00267 1087 aaKnown RBP31.47■■■□□ 2.63
LEMD2-214ENST00000614475 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
LEMD2-214ENST00000614475 HRCP23327 699 aa30.54■■■□□ 2.48
LEMD2-214ENST00000614475 PELP1Q8IZL8 1130 aaKnown RBP30.32■■■□□ 2.44
LEMD2-214ENST00000614475 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
LEMD2-214ENST00000614475 ABCC9O60706 1549 aa30.16■■■□□ 2.42
LEMD2-214ENST00000614475 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
LEMD2-214ENST00000614475 PPARGC1BQ86YN6 1023 aaKnown RBP30.05■■■□□ 2.4
LEMD2-214ENST00000614475 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
LEMD2-214ENST00000614475 MYO15BQ96JP2 1530 aa29.82■■■□□ 2.36
LEMD2-214ENST00000614475 PCGF6Q9BYE7 350 aa29.74■■■□□ 2.35
LEMD2-214ENST00000614475 RSF1Q96T23 1441 aaPredicted RBP29.51■■■□□ 2.32
LEMD2-214ENST00000614475 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
LEMD2-214ENST00000614475 NACADO15069 1562 aa29.4■■■□□ 2.3
LEMD2-214ENST00000614475 CECR2Q9BXF3 1484 aa29.34■■■□□ 2.29
LEMD2-214ENST00000614475 SCAF1Q9H7N4 1312 aaKnown RBP29.31■■■□□ 2.28
LEMD2-214ENST00000614475 MYT1Q01538 1121 aa29.28■■■□□ 2.28
LEMD2-214ENST00000614475 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
LEMD2-214ENST00000614475 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
LEMD2-214ENST00000614475 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
LEMD2-214ENST00000614475 RB1CC1Q8TDY2 1594 aa29.1■■■□□ 2.25
LEMD2-214ENST00000614475 MROH2BQ7Z745 1585 aa29.09■■■□□ 2.25
LEMD2-214ENST00000614475 PABPN1Q86U42 306 aaKnown RBP eCLIP29.03■■■□□ 2.246e-9■□□□□ 10.2
LEMD2-214ENST00000614475 WIZO95785 1651 aa28.89■■■□□ 2.21
LEMD2-214ENST00000614475 BAZ1AQ9NRL2 1556 aaPredicted RBP28.62■■■□□ 2.17
LEMD2-214ENST00000614475 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
LEMD2-214ENST00000614475 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
LEMD2-214ENST00000614475 SMARCA4P51532 1647 aa28.41■■■□□ 2.14
LEMD2-214ENST00000614475 ZEB1P37275 1124 aaPredicted RBP28.39■■■□□ 2.14
LEMD2-214ENST00000614475 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
LEMD2-214ENST00000614475 ACIN1Q9UKV3 1341 aaKnown RBP28.36■■■□□ 2.13
LEMD2-214ENST00000614475 NEUROD1Q13562 356 aa28.3■■■□□ 2.12
LEMD2-214ENST00000614475 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
LEMD2-214ENST00000614475 TOP2AP11388 1531 aaKnown RBP28.27■■■□□ 2.12
LEMD2-214ENST00000614475 ABCC8Q09428 1581 aa28.25■■■□□ 2.11
LEMD2-214ENST00000614475 GTF3C3Q9Y5Q9 886 aa28.24■■■□□ 2.11
LEMD2-214ENST00000614475 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
LEMD2-214ENST00000614475 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
LEMD2-214ENST00000614475 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
LEMD2-214ENST00000614475 SOGA1O94964 1423 aa28■■■□□ 2.07
LEMD2-214ENST00000614475 UBTFP17480 764 aaKnown RBP27.93■■■□□ 2.06
LEMD2-214ENST00000614475 CENPBP07199 599 aaPredicted RBP27.9■■■□□ 2.06
LEMD2-214ENST00000614475 ATAD2BQ9ULI0 1458 aa27.89■■■□□ 2.06
LEMD2-214ENST00000614475 RUSC2Q8N2Y8 1516 aa27.89■■■□□ 2.05
LEMD2-214ENST00000614475 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
LEMD2-214ENST00000614475 BAZ1BQ9UIG0 1483 aaKnown RBP27.85■■■□□ 2.05
LEMD2-214ENST00000614475 RANGAP1P46060 587 aaPredicted RBP27.78■■■□□ 2.04
LEMD2-214ENST00000614475 WRNQ14191 1432 aaPredicted RBP eCLIP27.77■■■□□ 2.04
LEMD2-214ENST00000614475 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
LEMD2-214ENST00000614475 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
LEMD2-214ENST00000614475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.57■■■□□ 2
LEMD2-214ENST00000614475 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
LEMD2-214ENST00000614475 SYNJ1O43426 1573 aa27.54■■■□□ 2
LEMD2-214ENST00000614475 BCL11AQ9H165 835 aa27.51■■□□□ 1.99
LEMD2-214ENST00000614475 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
LEMD2-214ENST00000614475 EEA1Q15075 1411 aa27.45■■□□□ 1.98
LEMD2-214ENST00000614475 CCER1Q8TC90 406 aaPredicted RBP27.42■■□□□ 1.98
LEMD2-214ENST00000614475 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
LEMD2-214ENST00000614475 YTHDC1Q96MU7 727 aaKnown RBP27.34■■□□□ 1.97
LEMD2-214ENST00000614475 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
LEMD2-214ENST00000614475 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
LEMD2-214ENST00000614475 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
LEMD2-214ENST00000614475 CLIP1P30622 1438 aa27.21■■□□□ 1.95
LEMD2-214ENST00000614475 HNRNPUL2Q1KMD3 747 aaKnown RBP27.17■■□□□ 1.94
LEMD2-214ENST00000614475 APLP2Q06481 763 aa27.17■■□□□ 1.94
LEMD2-214ENST00000614475 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
LEMD2-214ENST00000614475 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
LEMD2-214ENST00000614475 ANP32EQ9BTT0 268 aa27.08■■□□□ 1.93
LEMD2-214ENST00000614475 CUX1P39880 1505 aa27.06■■□□□ 1.92
LEMD2-214ENST00000614475 CFTRP13569 1480 aa27.04■■□□□ 1.92
LEMD2-214ENST00000614475 KIF21BO75037 1637 aa27.02■■□□□ 1.92
LEMD2-214ENST00000614475 CADPSQ9ULU8 1353 aa26.94■■□□□ 1.9
LEMD2-214ENST00000614475 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
LEMD2-214ENST00000614475 VPS8Q8N3P4 1428 aa26.92■■□□□ 1.9
LEMD2-214ENST00000614475 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
LEMD2-214ENST00000614475 CC2D2AQ9P2K1 1620 aa26.89■■□□□ 1.89
LEMD2-214ENST00000614475 PRXQ9BXM0 1461 aa26.85■■□□□ 1.89
LEMD2-214ENST00000614475 PRKCSHP14314 528 aaPredicted RBP26.84■■□□□ 1.89
LEMD2-214ENST00000614475 ZNF316A6NFI3 1004 aaPredicted RBP26.83■■□□□ 1.89
LEMD2-214ENST00000614475 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
LEMD2-214ENST00000614475 CUX2O14529 1486 aa26.83■■□□□ 1.89
LEMD2-214ENST00000614475 KANK4Q5T7N3 995 aaPredicted RBP26.82■■□□□ 1.88
LEMD2-214ENST00000614475 MIER1Q8N108 512 aa26.82■■□□□ 1.88
LEMD2-214ENST00000614475 P3H3Q8IVL6 736 aa26.77■■□□□ 1.88
LEMD2-214ENST00000614475 NESP48681 1621 aa26.73■■□□□ 1.87
LEMD2-214ENST00000614475 IGF1RP08069 1367 aa26.73■■□□□ 1.87
LEMD2-214ENST00000614475 TSHZ2Q9NRE2 1034 aa26.73■■□□□ 1.87
LEMD2-214ENST00000614475 ATP1B4Q9UN42 357 aaPredicted RBP26.73■■□□□ 1.87
LEMD2-214ENST00000614475 ITGAEP38570 1179 aa26.71■■□□□ 1.87
LEMD2-214ENST00000614475 FGD5Q6ZNL6 1462 aa26.7■■□□□ 1.86
LEMD2-214ENST00000614475 ARAP1Q96P48 1450 aa26.69■■□□□ 1.86
LEMD2-214ENST00000614475 FANCD2Q9BXW9 1451 aa26.67■■□□□ 1.86
LEMD2-214ENST00000614475 SUPT16HQ9Y5B9 1047 aaKnown RBP26.66■■□□□ 1.86
LEMD2-214ENST00000614475 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
LEMD2-214ENST00000614475 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
LEMD2-214ENST00000614475 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms