RNA–Protein interactions for RNA: ENST00000484937.5

PATJ-208, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5

Gene PATJ, Length 4,990 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-208ENST00000484937 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
PATJ-208ENST00000484937 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
PATJ-208ENST00000484937 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
PATJ-208ENST00000484937 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
PATJ-208ENST00000484937 APLP2Q06481 763 aa14.11□□□□□ -0.15
PATJ-208ENST00000484937 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
PATJ-208ENST00000484937 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
PATJ-208ENST00000484937 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
PATJ-208ENST00000484937 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
PATJ-208ENST00000484937 ZEB1P37275 1124 aaPredicted RBP13.88□□□□□ -0.19
PATJ-208ENST00000484937 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
PATJ-208ENST00000484937 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
PATJ-208ENST00000484937 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
PATJ-208ENST00000484937 UBTFP17480 764 aaKnown RBP13.62□□□□□ -0.23
PATJ-208ENST00000484937 TTBK1Q5TCY1 1321 aaPredicted RBP13.62□□□□□ -0.23
PATJ-208ENST00000484937 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
PATJ-208ENST00000484937 TRIM26Q12899 539 aaPredicted RBP13.5□□□□□ -0.25
PATJ-208ENST00000484937 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
PATJ-208ENST00000484937 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
PATJ-208ENST00000484937 HRCP23327 699 aa13.34□□□□□ -0.27
PATJ-208ENST00000484937 NEFLP07196 543 aa13.27□□□□□ -0.29
PATJ-208ENST00000484937 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
PATJ-208ENST00000484937 LOC105371045A0A1W2PR82 267 aa13.24□□□□□ -0.29
PATJ-208ENST00000484937 PPARGC1BQ86YN6 1023 aaKnown RBP13.22□□□□□ -0.29
PATJ-208ENST00000484937 MYT1Q01538 1121 aa13.14□□□□□ -0.31
PATJ-208ENST00000484937 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
PATJ-208ENST00000484937 ABCC9O60706 1549 aa13.12□□□□□ -0.31
PATJ-208ENST00000484937 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
PATJ-208ENST00000484937 ITGAEP38570 1179 aa13.04□□□□□ -0.32
PATJ-208ENST00000484937 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.32
PATJ-208ENST00000484937 ZCCHC6Q5VYS8 1495 aaKnown RBP12.98□□□□□ -0.33
PATJ-208ENST00000484937 PABPN1Q86U42 306 aaKnown RBP eCLIP12.95□□□□□ -0.34
PATJ-208ENST00000484937 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
PATJ-208ENST00000484937 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
PATJ-208ENST00000484937 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
PATJ-208ENST00000484937 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
PATJ-208ENST00000484937 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
PATJ-208ENST00000484937 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
PATJ-208ENST00000484937 DAXXQ9UER7 740 aaPredicted RBP12.77□□□□□ -0.36
PATJ-208ENST00000484937 SCRIBQ14160 1630 aa12.75□□□□□ -0.37
PATJ-208ENST00000484937 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
PATJ-208ENST00000484937 DCAF1Q9Y4B6 1507 aa12.74□□□□□ -0.37
PATJ-208ENST00000484937 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
PATJ-208ENST00000484937 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
PATJ-208ENST00000484937 ANP32CO43423 234 aa12.66□□□□□ -0.38
PATJ-208ENST00000484937 CNGB1Q14028 1251 aaPredicted RBP12.6□□□□□ -0.39
PATJ-208ENST00000484937 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
PATJ-208ENST00000484937 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
PATJ-208ENST00000484937 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
PATJ-208ENST00000484937 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
PATJ-208ENST00000484937 FBLN2P98095 1184 aa12.52□□□□□ -0.4
PATJ-208ENST00000484937 EEA1Q15075 1411 aa12.52□□□□□ -0.4
PATJ-208ENST00000484937 CLSPNQ9HAW4 1339 aa12.52□□□□□ -0.41
PATJ-208ENST00000484937 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
PATJ-208ENST00000484937 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
PATJ-208ENST00000484937 NACADO15069 1562 aa12.51□□□□□ -0.41
PATJ-208ENST00000484937 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
PATJ-208ENST00000484937 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
PATJ-208ENST00000484937 RSF1Q96T23 1441 aaPredicted RBP12.48□□□□□ -0.41
PATJ-208ENST00000484937 TONSLQ96HA7 1378 aa12.43□□□□□ -0.42
PATJ-208ENST00000484937 CLIP1P30622 1438 aa12.4□□□□□ -0.42
PATJ-208ENST00000484937 GOLGA3Q08378 1498 aa12.39□□□□□ -0.43
PATJ-208ENST00000484937 BCANQ96GW7 911 aa12.38□□□□□ -0.43
PATJ-208ENST00000484937 ZNF777Q9ULD5 760 aaPredicted RBP12.38□□□□□ -0.43
PATJ-208ENST00000484937 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
PATJ-208ENST00000484937 NEFMP07197 916 aa12.33□□□□□ -0.43
PATJ-208ENST00000484937 ZBTB47Q9UFB7 747 aaPredicted RBP12.33□□□□□ -0.44
PATJ-208ENST00000484937 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
PATJ-208ENST00000484937 BAZ1AQ9NRL2 1556 aaPredicted RBP12.32□□□□□ -0.44
PATJ-208ENST00000484937 CEP162Q5TB80 1403 aa12.31□□□□□ -0.44
PATJ-208ENST00000484937 MTUS2Q5JR59 1369 aa12.31□□□□□ -0.44
PATJ-208ENST00000484937 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
PATJ-208ENST00000484937 MYO15BQ96JP2 1530 aa12.3□□□□□ -0.44
PATJ-208ENST00000484937 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
PATJ-208ENST00000484937 CANXP27824 592 aaKnown RBP12.29□□□□□ -0.44
PATJ-208ENST00000484937 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
PATJ-208ENST00000484937 KIF27Q86VH2 1401 aa12.26□□□□□ -0.45
PATJ-208ENST00000484937 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
PATJ-208ENST00000484937 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
PATJ-208ENST00000484937 ANP32AP39687 249 aaKnown RBP12.24□□□□□ -0.45
PATJ-208ENST00000484937 DDX10Q13206 875 aaKnown RBP12.24□□□□□ -0.45
PATJ-208ENST00000484937 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
PATJ-208ENST00000484937 HNRNPUQ00839 825 aaKnown RBP eCLIP12.21□□□□□ -0.45
PATJ-208ENST00000484937 FKBP8Q14318 412 aa12.2□□□□□ -0.46
PATJ-208ENST00000484937 CHIC2Q9UKJ5 165 aa12.19□□□□□ -0.46
PATJ-208ENST00000484937 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
PATJ-208ENST00000484937 ESF1Q9H501 851 aaKnown RBP12.17□□□□□ -0.46
PATJ-208ENST00000484937 EIF4G2P78344 907 aaKnown RBP eCLIP12.15□□□□□ -0.46
PATJ-208ENST00000484937 TMC1Q8TDI8 760 aa12.15□□□□□ -0.46
PATJ-208ENST00000484937 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
PATJ-208ENST00000484937 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.13□□□□□ -0.47
PATJ-208ENST00000484937 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
PATJ-208ENST00000484937 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
PATJ-208ENST00000484937 MIER1Q8N108 512 aa12.11□□□□□ -0.47
PATJ-208ENST00000484937 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
PATJ-208ENST00000484937 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
PATJ-208ENST00000484937 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
PATJ-208ENST00000484937 FHAD1B1AJZ9 1412 aa12.1□□□□□ -0.47
PATJ-208ENST00000484937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.474e-6■□□□□ 10.1
PATJ-208ENST00000484937 UPF2Q9HAU5 1272 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 753.7 ms