RNA–Protein interactions for RNA: ENST00000513701.1

LEMD2-211, Transcript of LEM domain containing 2, humanhuman

TSL 4

Gene LEMD2, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-211ENST00000513701 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
LEMD2-211ENST00000513701 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
LEMD2-211ENST00000513701 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
LEMD2-211ENST00000513701 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
LEMD2-211ENST00000513701 ZCCHC6Q5VYS8 1495 aaKnown RBP16.02■□□□□ 0.15
LEMD2-211ENST00000513701 DCAF1Q9Y4B6 1507 aa15.75■□□□□ 0.11
LEMD2-211ENST00000513701 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
LEMD2-211ENST00000513701 ABCC9O60706 1549 aa15.49■□□□□ 0.07
LEMD2-211ENST00000513701 SHROOM4Q9ULL8 1493 aa15.48■□□□□ 0.07
LEMD2-211ENST00000513701 DCAF8L2P0C7V8 631 aa15.47■□□□□ 0.07
LEMD2-211ENST00000513701 NACADO15069 1562 aa15.36■□□□□ 0.05
LEMD2-211ENST00000513701 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
LEMD2-211ENST00000513701 SCRIBQ14160 1630 aa15.19■□□□□ 0.02
LEMD2-211ENST00000513701 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
LEMD2-211ENST00000513701 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
LEMD2-211ENST00000513701 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
LEMD2-211ENST00000513701 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
LEMD2-211ENST00000513701 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
LEMD2-211ENST00000513701 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
LEMD2-211ENST00000513701 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
LEMD2-211ENST00000513701 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
LEMD2-211ENST00000513701 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
LEMD2-211ENST00000513701 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
LEMD2-211ENST00000513701 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
LEMD2-211ENST00000513701 WIZO95785 1651 aa14.54□□□□□ -0.08
LEMD2-211ENST00000513701 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
LEMD2-211ENST00000513701 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
LEMD2-211ENST00000513701 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
LEMD2-211ENST00000513701 SMARCA2P51531 1590 aa14.3□□□□□ -0.12
LEMD2-211ENST00000513701 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
LEMD2-211ENST00000513701 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
LEMD2-211ENST00000513701 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
LEMD2-211ENST00000513701 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
LEMD2-211ENST00000513701 NCAPD3P42695 1498 aa14.18□□□□□ -0.14
LEMD2-211ENST00000513701 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
LEMD2-211ENST00000513701 TRIM41Q8WV44 630 aa14.01□□□□□ -0.17
LEMD2-211ENST00000513701 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
LEMD2-211ENST00000513701 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
LEMD2-211ENST00000513701 CFTRP13569 1480 aa13.89□□□□□ -0.19
LEMD2-211ENST00000513701 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
LEMD2-211ENST00000513701 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
LEMD2-211ENST00000513701 PRDM2Q13029 1718 aa13.82□□□□□ -0.2
LEMD2-211ENST00000513701 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
LEMD2-211ENST00000513701 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
LEMD2-211ENST00000513701 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
LEMD2-211ENST00000513701 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
LEMD2-211ENST00000513701 EEA1Q15075 1411 aa13.75□□□□□ -0.21
LEMD2-211ENST00000513701 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
LEMD2-211ENST00000513701 CUX1P39880 1505 aa13.73□□□□□ -0.21
LEMD2-211ENST00000513701 SOGA1O94964 1423 aa13.73□□□□□ -0.21
LEMD2-211ENST00000513701 LAMC3Q9Y6N6 1575 aa13.68□□□□□ -0.22
LEMD2-211ENST00000513701 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
LEMD2-211ENST00000513701 FANCD2Q9BXW9 1451 aa13.66□□□□□ -0.22
LEMD2-211ENST00000513701 NESP48681 1621 aa13.64□□□□□ -0.23
LEMD2-211ENST00000513701 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
LEMD2-211ENST00000513701 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
LEMD2-211ENST00000513701 KIF21BO75037 1637 aa13.59□□□□□ -0.23
LEMD2-211ENST00000513701 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
LEMD2-211ENST00000513701 GOLGA3Q08378 1498 aa13.56□□□□□ -0.24
LEMD2-211ENST00000513701 CEP164Q9UPV0 1460 aa13.56□□□□□ -0.24
LEMD2-211ENST00000513701 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
LEMD2-211ENST00000513701 PDS5BQ9NTI5 1447 aa13.54□□□□□ -0.24
LEMD2-211ENST00000513701 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
LEMD2-211ENST00000513701 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
LEMD2-211ENST00000513701 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
LEMD2-211ENST00000513701 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
LEMD2-211ENST00000513701 URB2Q14146 1524 aaKnown RBP13.5□□□□□ -0.25
LEMD2-211ENST00000513701 FOXD1Q16676 465 aa13.5□□□□□ -0.25
LEMD2-211ENST00000513701 KIF21AQ7Z4S6 1674 aa13.49□□□□□ -0.25
LEMD2-211ENST00000513701 PRXQ9BXM0 1461 aa13.48□□□□□ -0.25
LEMD2-211ENST00000513701 ERICH3Q5RHP9 1530 aa13.48□□□□□ -0.25
LEMD2-211ENST00000513701 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
LEMD2-211ENST00000513701 CUX2O14529 1486 aa13.47□□□□□ -0.25
LEMD2-211ENST00000513701 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
LEMD2-211ENST00000513701 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
LEMD2-211ENST00000513701 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
LEMD2-211ENST00000513701 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
LEMD2-211ENST00000513701 RAD54L2Q9Y4B4 1467 aa13.41□□□□□ -0.26
LEMD2-211ENST00000513701 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
LEMD2-211ENST00000513701 UBTFP17480 764 aaKnown RBP13.38□□□□□ -0.27
LEMD2-211ENST00000513701 IGF1RP08069 1367 aa13.37□□□□□ -0.27
LEMD2-211ENST00000513701 ABCA5Q8WWZ7 1642 aa13.35□□□□□ -0.27
LEMD2-211ENST00000513701 WDR62O43379 1518 aa13.34□□□□□ -0.27
LEMD2-211ENST00000513701 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
LEMD2-211ENST00000513701 CLIP1P30622 1438 aa13.32□□□□□ -0.28
LEMD2-211ENST00000513701 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
LEMD2-211ENST00000513701 CUL7Q14999 1698 aa13.31□□□□□ -0.28
LEMD2-211ENST00000513701 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
LEMD2-211ENST00000513701 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
LEMD2-211ENST00000513701 GAPVD1Q14C86 1478 aa13.26□□□□□ -0.29
LEMD2-211ENST00000513701 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
LEMD2-211ENST00000513701 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
LEMD2-211ENST00000513701 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
LEMD2-211ENST00000513701 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
LEMD2-211ENST00000513701 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
LEMD2-211ENST00000513701 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
LEMD2-211ENST00000513701 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
LEMD2-211ENST00000513701 ARHGAP35Q9NRY4 1499 aa13.19□□□□□ -0.3
LEMD2-211ENST00000513701 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
LEMD2-211ENST00000513701 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms