RNA–Protein interactions for RNA: ENST00000469381.1

GSE1-207, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 5,885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-207ENST00000469381 NISCHQ9Y2I1 1504 aa20.72■□□□□ 0.91
GSE1-207ENST00000469381 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
GSE1-207ENST00000469381 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
GSE1-207ENST00000469381 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
GSE1-207ENST00000469381 EHMT2Q96KQ7 1210 aa18.74■□□□□ 0.59
GSE1-207ENST00000469381 APLP2Q06481 763 aa18.33■□□□□ 0.53
GSE1-207ENST00000469381 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
GSE1-207ENST00000469381 FAM9AQ8IZU1 332 aaPredicted RBP18.25■□□□□ 0.51
GSE1-207ENST00000469381 TTBK1Q5TCY1 1321 aaPredicted RBP18.12■□□□□ 0.49
GSE1-207ENST00000469381 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
GSE1-207ENST00000469381 ABCC9O60706 1549 aa17.96■□□□□ 0.47
GSE1-207ENST00000469381 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
GSE1-207ENST00000469381 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
GSE1-207ENST00000469381 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
GSE1-207ENST00000469381 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
GSE1-207ENST00000469381 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
GSE1-207ENST00000469381 ATP1B4Q9UN42 357 aaPredicted RBP17.72■□□□□ 0.43
GSE1-207ENST00000469381 CENPBP07199 599 aaPredicted RBP17.72■□□□□ 0.43
GSE1-207ENST00000469381 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
GSE1-207ENST00000469381 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
GSE1-207ENST00000469381 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
GSE1-207ENST00000469381 YTHDC1Q96MU7 727 aaKnown RBP17.41■□□□□ 0.38
GSE1-207ENST00000469381 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
GSE1-207ENST00000469381 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
GSE1-207ENST00000469381 NEFLP07196 543 aa17.33■□□□□ 0.37
GSE1-207ENST00000469381 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
GSE1-207ENST00000469381 NACADO15069 1562 aa17.23■□□□□ 0.35
GSE1-207ENST00000469381 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
GSE1-207ENST00000469381 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
GSE1-207ENST00000469381 HRCP23327 699 aa17.15■□□□□ 0.34
GSE1-207ENST00000469381 ITGAEP38570 1179 aa17.15■□□□□ 0.34
GSE1-207ENST00000469381 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
GSE1-207ENST00000469381 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
GSE1-207ENST00000469381 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
GSE1-207ENST00000469381 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
GSE1-207ENST00000469381 POLR3GLQ9BT43 218 aa17■□□□□ 0.31
GSE1-207ENST00000469381 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
GSE1-207ENST00000469381 MYT1Q01538 1121 aa16.94■□□□□ 0.3
GSE1-207ENST00000469381 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
GSE1-207ENST00000469381 CNGB1Q14028 1251 aaPredicted RBP16.83■□□□□ 0.29
GSE1-207ENST00000469381 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
GSE1-207ENST00000469381 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
GSE1-207ENST00000469381 FAM50AQ14320 339 aaKnown RBP16.73■□□□□ 0.27
GSE1-207ENST00000469381 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
GSE1-207ENST00000469381 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
GSE1-207ENST00000469381 TRIM52Q96A61 297 aa16.62■□□□□ 0.25
GSE1-207ENST00000469381 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
GSE1-207ENST00000469381 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
GSE1-207ENST00000469381 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
GSE1-207ENST00000469381 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
GSE1-207ENST00000469381 BAZ1AQ9NRL2 1556 aaPredicted RBP16.43■□□□□ 0.22
GSE1-207ENST00000469381 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
GSE1-207ENST00000469381 RTL5Q5HYW3 569 aaPredicted RBP16.42■□□□□ 0.22
GSE1-207ENST00000469381 ANP32CO43423 234 aa16.41■□□□□ 0.22
GSE1-207ENST00000469381 FBLN2P98095 1184 aa16.41■□□□□ 0.22
GSE1-207ENST00000469381 BCANQ96GW7 911 aa16.4■□□□□ 0.22
GSE1-207ENST00000469381 GTF3C3Q9Y5Q9 886 aa16.38■□□□□ 0.21
GSE1-207ENST00000469381 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
GSE1-207ENST00000469381 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
GSE1-207ENST00000469381 P3H3Q8IVL6 736 aa16.32■□□□□ 0.2
GSE1-207ENST00000469381 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
GSE1-207ENST00000469381 ARID3CA6NKF2 412 aa16.27■□□□□ 0.19
GSE1-207ENST00000469381 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
GSE1-207ENST00000469381 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
GSE1-207ENST00000469381 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
GSE1-207ENST00000469381 ACIN1Q9UKV3 1341 aaKnown RBP16.15■□□□□ 0.18
GSE1-207ENST00000469381 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
GSE1-207ENST00000469381 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
GSE1-207ENST00000469381 PDS5BQ9NTI5 1447 aa16.14■□□□□ 0.17
GSE1-207ENST00000469381 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
GSE1-207ENST00000469381 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
GSE1-207ENST00000469381 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
GSE1-207ENST00000469381 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
GSE1-207ENST00000469381 BCL11AQ9H165 835 aa16.04■□□□□ 0.16
GSE1-207ENST00000469381 NEFMP07197 916 aa16.04■□□□□ 0.16
GSE1-207ENST00000469381 TONSLQ96HA7 1378 aa16.02■□□□□ 0.15
GSE1-207ENST00000469381 EEA1Q15075 1411 aa15.97■□□□□ 0.15
GSE1-207ENST00000469381 ANP32AP39687 249 aaKnown RBP15.96■□□□□ 0.15
GSE1-207ENST00000469381 FKBP8Q14318 412 aa15.94■□□□□ 0.14
GSE1-207ENST00000469381 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
GSE1-207ENST00000469381 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
GSE1-207ENST00000469381 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
GSE1-207ENST00000469381 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
GSE1-207ENST00000469381 TOP2AP11388 1531 aaKnown RBP15.9■□□□□ 0.14
GSE1-207ENST00000469381 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.14
GSE1-207ENST00000469381 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
GSE1-207ENST00000469381 CHGAP10645 457 aaKnown RBP15.89■□□□□ 0.13
GSE1-207ENST00000469381 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
GSE1-207ENST00000469381 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
GSE1-207ENST00000469381 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
GSE1-207ENST00000469381 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
GSE1-207ENST00000469381 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
GSE1-207ENST00000469381 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
GSE1-207ENST00000469381 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
GSE1-207ENST00000469381 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
GSE1-207ENST00000469381 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
GSE1-207ENST00000469381 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.122e-9■■□□□ 12.2
GSE1-207ENST00000469381 SALL2Q9Y467 1007 aaPredicted RBP15.79■□□□□ 0.12
GSE1-207ENST00000469381 CLIP1P30622 1438 aa15.78■□□□□ 0.12
GSE1-207ENST00000469381 EIF4G1Q04637 1599 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms