RNA–Protein interactions for RNA: ENST00000465582.5

SSBP1-205, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SSBP1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-205ENST00000465582 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
SSBP1-205ENST00000465582 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-205ENST00000465582 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.09
SSBP1-205ENST00000465582 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
SSBP1-205ENST00000465582 SENP3Q9H4L4 574 aaPredicted RBP14.81□□□□□ -0.04
SSBP1-205ENST00000465582 PLPPR3Q6T4P5 718 aa14.62□□□□□ -0.07
SSBP1-205ENST00000465582 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
SSBP1-205ENST00000465582 FOXD1Q16676 465 aa13.52□□□□□ -0.25
SSBP1-205ENST00000465582 ADRA2BP18089 450 aa13.44□□□□□ -0.26
SSBP1-205ENST00000465582 ABCC9O60706 1549 aa13.43□□□□□ -0.26
SSBP1-205ENST00000465582 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
SSBP1-205ENST00000465582 KCNA4P22459 653 aa13.11□□□□□ -0.31
SSBP1-205ENST00000465582 ZCCHC6Q5VYS8 1495 aaKnown RBP13.04□□□□□ -0.32
SSBP1-205ENST00000465582 RB1CC1Q8TDY2 1594 aa12.95□□□□□ -0.34
SSBP1-205ENST00000465582 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
SSBP1-205ENST00000465582 NACADO15069 1562 aa12.94□□□□□ -0.34
SSBP1-205ENST00000465582 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
SSBP1-205ENST00000465582 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
SSBP1-205ENST00000465582 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
SSBP1-205ENST00000465582 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
SSBP1-205ENST00000465582 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
SSBP1-205ENST00000465582 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
SSBP1-205ENST00000465582 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
SSBP1-205ENST00000465582 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
SSBP1-205ENST00000465582 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
SSBP1-205ENST00000465582 SLC4A1APQ9BWU0 796 aaKnown RBP12.7□□□□□ -0.38
SSBP1-205ENST00000465582 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
SSBP1-205ENST00000465582 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
SSBP1-205ENST00000465582 SCAF1Q9H7N4 1312 aaKnown RBP12.6□□□□□ -0.39
SSBP1-205ENST00000465582 MSH5O43196 834 aa12.52□□□□□ -0.41
SSBP1-205ENST00000465582 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSBP1-205ENST00000465582 CSRNP3Q8WYN3 585 aa12.47□□□□□ -0.41
SSBP1-205ENST00000465582 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
SSBP1-205ENST00000465582 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
SSBP1-205ENST00000465582 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
SSBP1-205ENST00000465582 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
SSBP1-205ENST00000465582 CC2D2AQ9P2K1 1620 aa12.17□□□□□ -0.46
SSBP1-205ENST00000465582 CECR2Q9BXF3 1484 aa12.14□□□□□ -0.47
SSBP1-205ENST00000465582 SMARCA4P51532 1647 aa12.12□□□□□ -0.47
SSBP1-205ENST00000465582 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-205ENST00000465582 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
SSBP1-205ENST00000465582 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
SSBP1-205ENST00000465582 MROH2BQ7Z745 1585 aa12.05□□□□□ -0.48
SSBP1-205ENST00000465582 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
SSBP1-205ENST00000465582 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
SSBP1-205ENST00000465582 ZBTB22O15209 634 aa11.98□□□□□ -0.49
SSBP1-205ENST00000465582 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
SSBP1-205ENST00000465582 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.49
SSBP1-205ENST00000465582 ATAD2BQ9ULI0 1458 aa11.96□□□□□ -0.49
SSBP1-205ENST00000465582 WIZO95785 1651 aa11.95□□□□□ -0.5
SSBP1-205ENST00000465582 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
SSBP1-205ENST00000465582 NCAPD3P42695 1498 aa11.91□□□□□ -0.5
SSBP1-205ENST00000465582 RSF1Q96T23 1441 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-205ENST00000465582 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
SSBP1-205ENST00000465582 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
SSBP1-205ENST00000465582 HOXD11P31277 338 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-205ENST00000465582 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
SSBP1-205ENST00000465582 NESP48681 1621 aa11.68□□□□□ -0.54
SSBP1-205ENST00000465582 ATXN8OSP0DMR3 200 aa11.66□□□□□ -0.54
SSBP1-205ENST00000465582 SUPT5HO00267 1087 aaKnown RBP11.65□□□□□ -0.54
SSBP1-205ENST00000465582 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
SSBP1-205ENST00000465582 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
SSBP1-205ENST00000465582 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
SSBP1-205ENST00000465582 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
SSBP1-205ENST00000465582 PRDM2Q13029 1718 aa11.58□□□□□ -0.56
SSBP1-205ENST00000465582 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
SSBP1-205ENST00000465582 CUX2O14529 1486 aa11.57□□□□□ -0.56
SSBP1-205ENST00000465582 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
SSBP1-205ENST00000465582 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
SSBP1-205ENST00000465582 CFTRP13569 1480 aa11.55□□□□□ -0.56
SSBP1-205ENST00000465582 THOC2Q8NI27 1593 aaKnown RBP11.52□□□□□ -0.57
SSBP1-205ENST00000465582 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
SSBP1-205ENST00000465582 FANCD2Q9BXW9 1451 aa11.48□□□□□ -0.57
SSBP1-205ENST00000465582 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
SSBP1-205ENST00000465582 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
SSBP1-205ENST00000465582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.41□□□□□ -0.58
SSBP1-205ENST00000465582 HNRNPUL2Q1KMD3 747 aaKnown RBP11.41□□□□□ -0.58
SSBP1-205ENST00000465582 WDR62O43379 1518 aa11.4□□□□□ -0.58
SSBP1-205ENST00000465582 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
SSBP1-205ENST00000465582 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
SSBP1-205ENST00000465582 DNMBPQ6XZF7 1577 aa11.34□□□□□ -0.59
SSBP1-205ENST00000465582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.595e-6■□□□□ 8.4
SSBP1-205ENST00000465582 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
SSBP1-205ENST00000465582 TOPBP1Q92547 1522 aa11.32□□□□□ -0.6
SSBP1-205ENST00000465582 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
SSBP1-205ENST00000465582 ABCC8Q09428 1581 aa11.31□□□□□ -0.6
SSBP1-205ENST00000465582 CUX1P39880 1505 aa11.3□□□□□ -0.6
SSBP1-205ENST00000465582 FKBP8Q14318 412 aa11.3□□□□□ -0.6
SSBP1-205ENST00000465582 SYNJ1O43426 1573 aa11.26□□□□□ -0.61
SSBP1-205ENST00000465582 BIVM-ERCC5R4GMW8 1640 aa11.25□□□□□ -0.61
SSBP1-205ENST00000465582 POLA1P09884 1462 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-205ENST00000465582 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
SSBP1-205ENST00000465582 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
SSBP1-205ENST00000465582 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.611e-7■□□□□ 10.2
SSBP1-205ENST00000465582 WDR97A6NE52 1622 aa11.21□□□□□ -0.61
SSBP1-205ENST00000465582 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
SSBP1-205ENST00000465582 APLP2Q06481 763 aa11.21□□□□□ -0.61
SSBP1-205ENST00000465582 IFT140Q96RY7 1462 aa11.2□□□□□ -0.62
SSBP1-205ENST00000465582 EIF4G3O43432 1585 aaKnown RBP11.19□□□□□ -0.62
SSBP1-205ENST00000465582 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms