RNA–Protein interactions for RNA: ENST00000559424.1

SECISBP2L-208, Transcript of SECIS binding protein 2 like, humanhuman

TSL 1 (best)

Gene SECISBP2L, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2L-208ENST00000559424 NISCHQ9Y2I1 1504 aa35.7■■■■□ 3.31
SECISBP2L-208ENST00000559424 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
SECISBP2L-208ENST00000559424 ABCC9O60706 1549 aa31.6■■■□□ 2.65
SECISBP2L-208ENST00000559424 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.43
SECISBP2L-208ENST00000559424 NACADO15069 1562 aa30.15■■■□□ 2.42
SECISBP2L-208ENST00000559424 DCAF8L2P0C7V8 631 aa29.9■■■□□ 2.38
SECISBP2L-208ENST00000559424 MYO15BQ96JP2 1530 aa29.9■■■□□ 2.38
SECISBP2L-208ENST00000559424 ZCCHC6Q5VYS8 1495 aaKnown RBP29.66■■■□□ 2.34
SECISBP2L-208ENST00000559424 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
SECISBP2L-208ENST00000559424 PABPN1Q86U42 306 aaKnown RBP eCLIP29.44■■■□□ 2.3
SECISBP2L-208ENST00000559424 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
SECISBP2L-208ENST00000559424 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
SECISBP2L-208ENST00000559424 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
SECISBP2L-208ENST00000559424 SHROOM4Q9ULL8 1493 aa29.12■■■□□ 2.25
SECISBP2L-208ENST00000559424 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
SECISBP2L-208ENST00000559424 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
SECISBP2L-208ENST00000559424 CC2D2AQ9P2K1 1620 aa28.58■■■□□ 2.17
SECISBP2L-208ENST00000559424 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
SECISBP2L-208ENST00000559424 NCAPD3P42695 1498 aa27.84■■■□□ 2.05
SECISBP2L-208ENST00000559424 SMARCA4P51532 1647 aa27.77■■■□□ 2.04
SECISBP2L-208ENST00000559424 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.03
SECISBP2L-208ENST00000559424 SMARCA2P51531 1590 aa27.72■■■□□ 2.03
SECISBP2L-208ENST00000559424 BAZ1AQ9NRL2 1556 aaPredicted RBP27.71■■■□□ 2.03
SECISBP2L-208ENST00000559424 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
SECISBP2L-208ENST00000559424 PEG3Q9GZU2 1588 aa27.56■■■□□ 2
SECISBP2L-208ENST00000559424 BAZ1BQ9UIG0 1483 aaKnown RBP27.5■■□□□ 1.99
SECISBP2L-208ENST00000559424 MROH2BQ7Z745 1585 aa27.47■■□□□ 1.99
SECISBP2L-208ENST00000559424 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
SECISBP2L-208ENST00000559424 CUX2O14529 1486 aa27.23■■□□□ 1.95
SECISBP2L-208ENST00000559424 NESP48681 1621 aa27.21■■□□□ 1.95
SECISBP2L-208ENST00000559424 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.94
SECISBP2L-208ENST00000559424 WIZO95785 1651 aa27.11■■□□□ 1.93
SECISBP2L-208ENST00000559424 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
SECISBP2L-208ENST00000559424 PDS5BQ9NTI5 1447 aa27■■□□□ 1.91
SECISBP2L-208ENST00000559424 CADPSQ9ULU8 1353 aa26.99■■□□□ 1.91
SECISBP2L-208ENST00000559424 THOC2Q8NI27 1593 aaKnown RBP26.92■■□□□ 1.9
SECISBP2L-208ENST00000559424 DNAJC5Q9H3Z4 198 aa26.88■■□□□ 1.89
SECISBP2L-208ENST00000559424 TOP2AP11388 1531 aaKnown RBP26.86■■□□□ 1.89
SECISBP2L-208ENST00000559424 KIF21AQ7Z4S6 1674 aa26.84■■□□□ 1.89
SECISBP2L-208ENST00000559424 CFTRP13569 1480 aa26.74■■□□□ 1.87
SECISBP2L-208ENST00000559424 MRC2Q9UBG0 1479 aa26.73■■□□□ 1.87
SECISBP2L-208ENST00000559424 CEP164Q9UPV0 1460 aa26.67■■□□□ 1.86
SECISBP2L-208ENST00000559424 WDR62O43379 1518 aa26.66■■□□□ 1.86
SECISBP2L-208ENST00000559424 FANCD2Q9BXW9 1451 aa26.65■■□□□ 1.86
SECISBP2L-208ENST00000559424 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
SECISBP2L-208ENST00000559424 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
SECISBP2L-208ENST00000559424 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
SECISBP2L-208ENST00000559424 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
SECISBP2L-208ENST00000559424 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
SECISBP2L-208ENST00000559424 TOPBP1Q92547 1522 aa26.17■■□□□ 1.78
SECISBP2L-208ENST00000559424 IFT140Q96RY7 1462 aa26.14■■□□□ 1.78
SECISBP2L-208ENST00000559424 DNMBPQ6XZF7 1577 aa26.11■■□□□ 1.77
SECISBP2L-208ENST00000559424 ZNF608Q9ULD9 1512 aaPredicted RBP26.01■■□□□ 1.75
SECISBP2L-208ENST00000559424 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
SECISBP2L-208ENST00000559424 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
SECISBP2L-208ENST00000559424 SUPT5HO00267 1087 aaKnown RBP25.93■■□□□ 1.74
SECISBP2L-208ENST00000559424 TARBP1Q13395 1621 aaKnown RBP25.92■■□□□ 1.74
SECISBP2L-208ENST00000559424 EIF4G3O43432 1585 aaKnown RBP25.89■■□□□ 1.73
SECISBP2L-208ENST00000559424 SOGA1O94964 1423 aa25.81■■□□□ 1.72
SECISBP2L-208ENST00000559424 AQRO60306 1485 aaKnown RBP eCLIP25.81■■□□□ 1.727e-7■■■■■ 28.5
SECISBP2L-208ENST00000559424 CUX1P39880 1505 aa25.8■■□□□ 1.72
SECISBP2L-208ENST00000559424 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
SECISBP2L-208ENST00000559424 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
SECISBP2L-208ENST00000559424 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
SECISBP2L-208ENST00000559424 TRIM41Q8WV44 630 aa25.71■■□□□ 1.71
SECISBP2L-208ENST00000559424 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
SECISBP2L-208ENST00000559424 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
SECISBP2L-208ENST00000559424 CHD1O14646 1710 aa25.58■■□□□ 1.69
SECISBP2L-208ENST00000559424 SNAPC4Q5SXM2 1469 aa25.57■■□□□ 1.68
SECISBP2L-208ENST00000559424 MAGI1Q96QZ7 1491 aaPredicted RBP25.57■■□□□ 1.68
SECISBP2L-208ENST00000559424 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
SECISBP2L-208ENST00000559424 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
SECISBP2L-208ENST00000559424 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
SECISBP2L-208ENST00000559424 FBLN2P98095 1184 aa25.56■■□□□ 1.68
SECISBP2L-208ENST00000559424 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
SECISBP2L-208ENST00000559424 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
SECISBP2L-208ENST00000559424 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.67
SECISBP2L-208ENST00000559424 GAPVD1Q14C86 1478 aa25.51■■□□□ 1.67
SECISBP2L-208ENST00000559424 TOP2BQ02880 1626 aa25.48■■□□□ 1.67
SECISBP2L-208ENST00000559424 SYNJ2O15056 1496 aa25.47■■□□□ 1.67
SECISBP2L-208ENST00000559424 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
SECISBP2L-208ENST00000559424 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
SECISBP2L-208ENST00000559424 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
SECISBP2L-208ENST00000559424 SYNJ1O43426 1573 aa25.42■■□□□ 1.66
SECISBP2L-208ENST00000559424 PBRM1Q86U86 1689 aa25.41■■□□□ 1.66
SECISBP2L-208ENST00000559424 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
SECISBP2L-208ENST00000559424 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
SECISBP2L-208ENST00000559424 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
SECISBP2L-208ENST00000559424 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
SECISBP2L-208ENST00000559424 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
SECISBP2L-208ENST00000559424 GRIN2AQ12879 1464 aa25.24■■□□□ 1.63
SECISBP2L-208ENST00000559424 FHAD1B1AJZ9 1412 aa25.22■■□□□ 1.63
SECISBP2L-208ENST00000559424 NUP160Q12769 1436 aa25.18■■□□□ 1.62
SECISBP2L-208ENST00000559424 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
SECISBP2L-208ENST00000559424 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
SECISBP2L-208ENST00000559424 SHROOM2Q13796 1616 aa25■■□□□ 1.59
SECISBP2L-208ENST00000559424 IGF1RP08069 1367 aa24.96■■□□□ 1.59
SECISBP2L-208ENST00000559424 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
SECISBP2L-208ENST00000559424 TRHP20396 242 aaPredicted RBP24.93■■□□□ 1.58
SECISBP2L-208ENST00000559424 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms