RNA–Protein interactions for RNA: ENST00000442696.6

LEMD2-203, Transcript of LEM domain containing 2, humanhuman

TSL 5

Gene LEMD2, Length 839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-203ENST00000442696 NISCHQ9Y2I1 1504 aa54.21■■■■■ 6.27
LEMD2-203ENST00000442696 CCDC180Q9P1Z9 1646 aa48.29■■■■■ 5.32
LEMD2-203ENST00000442696 ABCC9O60706 1549 aa47.51■■■■■ 5.2
LEMD2-203ENST00000442696 DCAF8L2P0C7V8 631 aa45.64■■■■■ 4.9
LEMD2-203ENST00000442696 RB1CC1Q8TDY2 1594 aa45.62■■■■■ 4.89
LEMD2-203ENST00000442696 NACADO15069 1562 aa45.47■■■■■ 4.87
LEMD2-203ENST00000442696 ZCCHC6Q5VYS8 1495 aaKnown RBP45.09■■■■■ 4.81
LEMD2-203ENST00000442696 MYO15BQ96JP2 1530 aa45.06■■■■■ 4.8
LEMD2-203ENST00000442696 DCAF1Q9Y4B6 1507 aa44.8■■■■■ 4.76
LEMD2-203ENST00000442696 UNC13AQ9UPW8 1703 aa44.46■■■■■ 4.71
LEMD2-203ENST00000442696 PABPN1Q86U42 306 aaKnown RBP eCLIP44.38■■■■■ 4.7
LEMD2-203ENST00000442696 SCRIBQ14160 1630 aa44.1■■■■■ 4.65
LEMD2-203ENST00000442696 BICRAQ9NZM4 1560 aa44.09■■■■■ 4.65
LEMD2-203ENST00000442696 SHROOM4Q9ULL8 1493 aa43.69■■■■■ 4.58
LEMD2-203ENST00000442696 DNAJC5BQ9UF47 199 aa43.67■■■■■ 4.58
LEMD2-203ENST00000442696 EIF4G1Q04637 1599 aaKnown RBP43.03■■■■■ 4.48
LEMD2-203ENST00000442696 CC2D2AQ9P2K1 1620 aa42.92■■■■■ 4.46
LEMD2-203ENST00000442696 CECR2Q9BXF3 1484 aa42.7■■■■■ 4.43
LEMD2-203ENST00000442696 SMARCA4P51532 1647 aa42.11■■■■■ 4.33
LEMD2-203ENST00000442696 BAZ1AQ9NRL2 1556 aaPredicted RBP42.08■■■■■ 4.33
LEMD2-203ENST00000442696 ATAD2BQ9ULI0 1458 aa41.93■■■■■ 4.3
LEMD2-203ENST00000442696 SMARCA2P51531 1590 aa41.93■■■■■ 4.3
LEMD2-203ENST00000442696 NCAPD3P42695 1498 aa41.92■■■■■ 4.3
LEMD2-203ENST00000442696 MROH2BQ7Z745 1585 aa41.76■■■■■ 4.28
LEMD2-203ENST00000442696 HMGXB3Q12766 1538 aa41.71■■■■■ 4.27
LEMD2-203ENST00000442696 BAZ1BQ9UIG0 1483 aaKnown RBP41.66■■■■■ 4.26
LEMD2-203ENST00000442696 PEG3Q9GZU2 1588 aa41.64■■■■■ 4.26
LEMD2-203ENST00000442696 WIZO95785 1651 aa41.33■■■■■ 4.21
LEMD2-203ENST00000442696 RSF1Q96T23 1441 aaPredicted RBP41.22■■■■■ 4.19
LEMD2-203ENST00000442696 ERCC6Q03468 1493 aa41.05■■■■■ 4.16
LEMD2-203ENST00000442696 NESP48681 1621 aa41■■■■■ 4.15
LEMD2-203ENST00000442696 LAMC3Q9Y6N6 1575 aa40.9■■■■■ 4.14
LEMD2-203ENST00000442696 TOP2AP11388 1531 aaKnown RBP40.88■■■■■ 4.14
LEMD2-203ENST00000442696 CADPSQ9ULU8 1353 aa40.74■■■■■ 4.11
LEMD2-203ENST00000442696 PDS5BQ9NTI5 1447 aa40.69■■■■■ 4.1
LEMD2-203ENST00000442696 CUX2O14529 1486 aa40.58■■■■■ 4.09
LEMD2-203ENST00000442696 KIF21AQ7Z4S6 1674 aa40.51■■■■■ 4.08
LEMD2-203ENST00000442696 CFTRP13569 1480 aa40.41■■■■■ 4.06
LEMD2-203ENST00000442696 CCDC88BA6NC98 1476 aa40.4■■■■■ 4.06
LEMD2-203ENST00000442696 THOC2Q8NI27 1593 aaKnown RBP40.38■■■■■ 4.05
LEMD2-203ENST00000442696 FANCD2Q9BXW9 1451 aa40.29■■■■■ 4.04
LEMD2-203ENST00000442696 CEP164Q9UPV0 1460 aa40.29■■■■■ 4.04
LEMD2-203ENST00000442696 SUPT5HO00267 1087 aaKnown RBP40.24■■■■■ 4.03
LEMD2-203ENST00000442696 MRC2Q9UBG0 1479 aa40.24■■■■■ 4.03
LEMD2-203ENST00000442696 PRDM2Q13029 1718 aa40.11■■■■■ 4.01
LEMD2-203ENST00000442696 WDR62O43379 1518 aa40.06■■■■■ 4
LEMD2-203ENST00000442696 URB2Q14146 1524 aaKnown RBP39.84■■■■□ 3.97
LEMD2-203ENST00000442696 ABCC8Q09428 1581 aa39.65■■■■□ 3.94
LEMD2-203ENST00000442696 TOPBP1Q92547 1522 aa39.6■■■■□ 3.93
LEMD2-203ENST00000442696 DNAJC5Q9H3Z4 198 aa39.58■■■■□ 3.93
LEMD2-203ENST00000442696 DNMBPQ6XZF7 1577 aa39.55■■■■□ 3.92
LEMD2-203ENST00000442696 IFT140Q96RY7 1462 aa39.43■■■■□ 3.9
LEMD2-203ENST00000442696 POLA1P09884 1462 aaPredicted RBP39.24■■■■□ 3.87
LEMD2-203ENST00000442696 ZNF608Q9ULD9 1512 aaPredicted RBP39.21■■■■□ 3.87
LEMD2-203ENST00000442696 CUX1P39880 1505 aa39.19■■■■□ 3.86
LEMD2-203ENST00000442696 SOGA1O94964 1423 aa39.14■■■■□ 3.86
LEMD2-203ENST00000442696 FGD5Q6ZNL6 1462 aa39.14■■■■□ 3.86
LEMD2-203ENST00000442696 TARBP1Q13395 1621 aaKnown RBP39.13■■■■□ 3.85
LEMD2-203ENST00000442696 RAD54L2Q9Y4B4 1467 aa39.09■■■■□ 3.85
LEMD2-203ENST00000442696 EIF4G3O43432 1585 aaKnown RBP39.08■■■■□ 3.85
LEMD2-203ENST00000442696 AQRO60306 1485 aaKnown RBP eCLIP39.01■■■■□ 3.842e-6■■■■■ 33.7
LEMD2-203ENST00000442696 OSCARQ8IYS5 282 aa38.96■■■■□ 3.83
LEMD2-203ENST00000442696 WRNQ14191 1432 aaPredicted RBP eCLIP38.95■■■■□ 3.83
LEMD2-203ENST00000442696 TDRD9Q8NDG6 1382 aaKnown RBP38.95■■■■□ 3.83
LEMD2-203ENST00000442696 WDR97A6NE52 1622 aa38.85■■■■□ 3.81
LEMD2-203ENST00000442696 TOP2BQ02880 1626 aa38.83■■■■□ 3.81
LEMD2-203ENST00000442696 BIVM-ERCC5R4GMW8 1640 aa38.81■■■■□ 3.8
LEMD2-203ENST00000442696 SYNJ1O43426 1573 aa38.78■■■■□ 3.8
LEMD2-203ENST00000442696 FBLN2P98095 1184 aa38.76■■■■□ 3.8
LEMD2-203ENST00000442696 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
LEMD2-203ENST00000442696 GRIN2BQ13224 1484 aa38.69■■■■□ 3.78
LEMD2-203ENST00000442696 GAPVD1Q14C86 1478 aa38.67■■■■□ 3.78
LEMD2-203ENST00000442696 SNAPC4Q5SXM2 1469 aa38.66■■■■□ 3.78
LEMD2-203ENST00000442696 CHD1O14646 1710 aa38.63■■■■□ 3.77
LEMD2-203ENST00000442696 MAGI1Q96QZ7 1491 aaPredicted RBP38.6■■■■□ 3.77
LEMD2-203ENST00000442696 PBRM1Q86U86 1689 aa38.58■■■■□ 3.77
LEMD2-203ENST00000442696 CHMP7Q8WUX9 453 aaPredicted RBP38.57■■■■□ 3.76
LEMD2-203ENST00000442696 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
LEMD2-203ENST00000442696 SYNJ2O15056 1496 aa38.45■■■■□ 3.75
LEMD2-203ENST00000442696 TRIM41Q8WV44 630 aa38.35■■■■□ 3.73
LEMD2-203ENST00000442696 ERICH3Q5RHP9 1530 aa38.28■■■■□ 3.72
LEMD2-203ENST00000442696 RIMBP3CA6NJZ7 1639 aa38.26■■■■□ 3.71
LEMD2-203ENST00000442696 RIMBP3BA6NNM3 1639 aa38.26■■■■□ 3.71
LEMD2-203ENST00000442696 RIMBP3Q9UFD9 1639 aa38.26■■■■□ 3.71
LEMD2-203ENST00000442696 ADAMTS12P58397 1594 aa38.23■■■■□ 3.71
LEMD2-203ENST00000442696 ARHGEF11O15085 1522 aa38.23■■■■□ 3.71
LEMD2-203ENST00000442696 FHAD1B1AJZ9 1412 aa38.21■■■■□ 3.71
LEMD2-203ENST00000442696 KIF27Q86VH2 1401 aa38.19■■■■□ 3.7
LEMD2-203ENST00000442696 GRIN2AQ12879 1464 aa38.17■■■■□ 3.7
LEMD2-203ENST00000442696 CLASP1Q7Z460 1538 aa38.15■■■■□ 3.7
LEMD2-203ENST00000442696 CYB5RLQ6IPT4 315 aa38■■■■□ 3.67
LEMD2-203ENST00000442696 IGF1RP08069 1367 aa37.97■■■■□ 3.67
LEMD2-203ENST00000442696 NUP160Q12769 1436 aa37.96■■■■□ 3.67
LEMD2-203ENST00000442696 CEP170Q5SW79 1584 aa37.95■■■■□ 3.67
LEMD2-203ENST00000442696 CUL7Q14999 1698 aa37.92■■■■□ 3.66
LEMD2-203ENST00000442696 ARAP1Q96P48 1450 aa37.89■■■■□ 3.66
LEMD2-203ENST00000442696 CARMIL1Q5VZK9 1371 aa37.8■■■■□ 3.64
LEMD2-203ENST00000442696 RUSC2Q8N2Y8 1516 aa37.68■■■■□ 3.62
LEMD2-203ENST00000442696 JPH4Q96JJ6 628 aa37.68■■■■□ 3.62
LEMD2-203ENST00000442696 SHROOM2Q13796 1616 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms