RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-215ENST00000635137 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
PATJ-215ENST00000635137 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
PATJ-215ENST00000635137 ZCCHC6Q5VYS8 1495 aaKnown RBP23.85■■□□□ 1.41
PATJ-215ENST00000635137 DCAF1Q9Y4B6 1507 aa23.58■■□□□ 1.37
PATJ-215ENST00000635137 ABCC9O60706 1549 aa23.55■■□□□ 1.36
PATJ-215ENST00000635137 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
PATJ-215ENST00000635137 MYO15BQ96JP2 1530 aa23.36■■□□□ 1.33
PATJ-215ENST00000635137 NACADO15069 1562 aa23.22■■□□□ 1.31
PATJ-215ENST00000635137 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
PATJ-215ENST00000635137 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
PATJ-215ENST00000635137 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
PATJ-215ENST00000635137 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
PATJ-215ENST00000635137 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
PATJ-215ENST00000635137 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
PATJ-215ENST00000635137 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
PATJ-215ENST00000635137 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
PATJ-215ENST00000635137 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
PATJ-215ENST00000635137 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
PATJ-215ENST00000635137 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
PATJ-215ENST00000635137 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
PATJ-215ENST00000635137 WIZO95785 1651 aa21.73■■□□□ 1.07
PATJ-215ENST00000635137 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
PATJ-215ENST00000635137 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
PATJ-215ENST00000635137 SMARCA2P51531 1590 aa21.59■■□□□ 1.05
PATJ-215ENST00000635137 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
PATJ-215ENST00000635137 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
PATJ-215ENST00000635137 BAZ1BQ9UIG0 1483 aaKnown RBP21.44■■□□□ 1.02
PATJ-215ENST00000635137 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
PATJ-215ENST00000635137 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
PATJ-215ENST00000635137 CCDC88BA6NC98 1476 aa21.31■■□□□ 1
PATJ-215ENST00000635137 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
PATJ-215ENST00000635137 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
PATJ-215ENST00000635137 TRIM41Q8WV44 630 aa20.95■□□□□ 0.95
PATJ-215ENST00000635137 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
PATJ-215ENST00000635137 CFTRP13569 1480 aa20.89■□□□□ 0.93
PATJ-215ENST00000635137 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
PATJ-215ENST00000635137 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
PATJ-215ENST00000635137 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
PATJ-215ENST00000635137 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
PATJ-215ENST00000635137 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
PATJ-215ENST00000635137 NESP48681 1621 aa20.63■□□□□ 0.89
PATJ-215ENST00000635137 TOP2BQ02880 1626 aa20.59■□□□□ 0.89
PATJ-215ENST00000635137 FANCD2Q9BXW9 1451 aa20.59■□□□□ 0.89
PATJ-215ENST00000635137 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
PATJ-215ENST00000635137 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
PATJ-215ENST00000635137 BIVM-ERCC5R4GMW8 1640 aa20.57■□□□□ 0.88
PATJ-215ENST00000635137 CUX1P39880 1505 aa20.5■□□□□ 0.87
PATJ-215ENST00000635137 EEA1Q15075 1411 aa20.5■□□□□ 0.87
PATJ-215ENST00000635137 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
PATJ-215ENST00000635137 FAM9AQ8IZU1 332 aaPredicted RBP20.46■□□□□ 0.87
PATJ-215ENST00000635137 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PATJ-215ENST00000635137 SOGA1O94964 1423 aa20.39■□□□□ 0.85
PATJ-215ENST00000635137 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
PATJ-215ENST00000635137 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
PATJ-215ENST00000635137 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
PATJ-215ENST00000635137 LOC105371045A0A1W2PR82 267 aa20.34■□□□□ 0.85
PATJ-215ENST00000635137 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
PATJ-215ENST00000635137 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
PATJ-215ENST00000635137 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
PATJ-215ENST00000635137 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
PATJ-215ENST00000635137 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
PATJ-215ENST00000635137 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
PATJ-215ENST00000635137 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
PATJ-215ENST00000635137 CUX2O14529 1486 aa20.18■□□□□ 0.82
PATJ-215ENST00000635137 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PATJ-215ENST00000635137 KIF21BO75037 1637 aa20.16■□□□□ 0.82
PATJ-215ENST00000635137 WDR62O43379 1518 aa20.14■□□□□ 0.82
PATJ-215ENST00000635137 GOLGA3Q08378 1498 aa20.14■□□□□ 0.81
PATJ-215ENST00000635137 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
PATJ-215ENST00000635137 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
PATJ-215ENST00000635137 THOC2Q8NI27 1593 aaKnown RBP20.09■□□□□ 0.81
PATJ-215ENST00000635137 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
PATJ-215ENST00000635137 TNIKQ9UKE5 1360 aa20.07■□□□□ 0.8
PATJ-215ENST00000635137 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
PATJ-215ENST00000635137 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
PATJ-215ENST00000635137 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
PATJ-215ENST00000635137 IGF1RP08069 1367 aa20.05■□□□□ 0.8
PATJ-215ENST00000635137 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PATJ-215ENST00000635137 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
PATJ-215ENST00000635137 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
PATJ-215ENST00000635137 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
PATJ-215ENST00000635137 CARMIL1Q5VZK9 1371 aa19.98■□□□□ 0.79
PATJ-215ENST00000635137 ABCA5Q8WWZ7 1642 aa19.98■□□□□ 0.79
PATJ-215ENST00000635137 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
PATJ-215ENST00000635137 CUL7Q14999 1698 aa19.96■□□□□ 0.79
PATJ-215ENST00000635137 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
PATJ-215ENST00000635137 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
PATJ-215ENST00000635137 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
PATJ-215ENST00000635137 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
PATJ-215ENST00000635137 ZNF608Q9ULD9 1512 aaPredicted RBP19.84■□□□□ 0.77
PATJ-215ENST00000635137 CLIP1P30622 1438 aa19.8■□□□□ 0.76
PATJ-215ENST00000635137 FHAD1B1AJZ9 1412 aa19.78■□□□□ 0.76
PATJ-215ENST00000635137 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
PATJ-215ENST00000635137 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
PATJ-215ENST00000635137 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
PATJ-215ENST00000635137 CTTNBP2Q8WZ74 1663 aa19.7■□□□□ 0.74
PATJ-215ENST00000635137 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
PATJ-215ENST00000635137 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
PATJ-215ENST00000635137 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
PATJ-215ENST00000635137 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms