RNA–Protein interactions for RNA: ENST00000508327.5

LEMD2-207, Transcript of LEM domain containing 2, humanhuman

TSL 2 BASIC

Gene LEMD2, Length 1,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-207ENST00000508327 NISCHQ9Y2I1 1504 aa29.74■■■□□ 2.35
LEMD2-207ENST00000508327 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
LEMD2-207ENST00000508327 ABCC9O60706 1549 aa25.78■■□□□ 1.72
LEMD2-207ENST00000508327 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
LEMD2-207ENST00000508327 ZCCHC6Q5VYS8 1495 aaKnown RBP24.79■■□□□ 1.56
LEMD2-207ENST00000508327 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
LEMD2-207ENST00000508327 NACADO15069 1562 aa24.75■■□□□ 1.55
LEMD2-207ENST00000508327 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
LEMD2-207ENST00000508327 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
LEMD2-207ENST00000508327 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
LEMD2-207ENST00000508327 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
LEMD2-207ENST00000508327 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.46
LEMD2-207ENST00000508327 BICRAQ9NZM4 1560 aa24.07■■□□□ 1.44
LEMD2-207ENST00000508327 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
LEMD2-207ENST00000508327 DNAJC5BQ9UF47 199 aa23.61■■□□□ 1.37
LEMD2-207ENST00000508327 EIF4G1Q04637 1599 aaKnown RBP23.4■■□□□ 1.34
LEMD2-207ENST00000508327 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
LEMD2-207ENST00000508327 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
LEMD2-207ENST00000508327 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
LEMD2-207ENST00000508327 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
LEMD2-207ENST00000508327 MROH2BQ7Z745 1585 aa22.96■■□□□ 1.27
LEMD2-207ENST00000508327 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
LEMD2-207ENST00000508327 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
LEMD2-207ENST00000508327 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
LEMD2-207ENST00000508327 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
LEMD2-207ENST00000508327 WIZO95785 1651 aa22.75■■□□□ 1.23
LEMD2-207ENST00000508327 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
LEMD2-207ENST00000508327 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
LEMD2-207ENST00000508327 RSF1Q96T23 1441 aaPredicted RBP22.71■■□□□ 1.23
LEMD2-207ENST00000508327 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
LEMD2-207ENST00000508327 NESP48681 1621 aa22.36■■□□□ 1.17
LEMD2-207ENST00000508327 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
LEMD2-207ENST00000508327 LAMC3Q9Y6N6 1575 aa22.22■■□□□ 1.15
LEMD2-207ENST00000508327 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
LEMD2-207ENST00000508327 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
LEMD2-207ENST00000508327 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
LEMD2-207ENST00000508327 CFTRP13569 1480 aa22.09■■□□□ 1.13
LEMD2-207ENST00000508327 KIF21AQ7Z4S6 1674 aa22.09■■□□□ 1.13
LEMD2-207ENST00000508327 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
LEMD2-207ENST00000508327 FANCD2Q9BXW9 1451 aa21.97■■□□□ 1.11
LEMD2-207ENST00000508327 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
LEMD2-207ENST00000508327 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
LEMD2-207ENST00000508327 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
LEMD2-207ENST00000508327 MRC2Q9UBG0 1479 aa21.86■■□□□ 1.09
LEMD2-207ENST00000508327 CUX2O14529 1486 aa21.85■■□□□ 1.09
LEMD2-207ENST00000508327 WDR62O43379 1518 aa21.79■■□□□ 1.08
LEMD2-207ENST00000508327 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
LEMD2-207ENST00000508327 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
LEMD2-207ENST00000508327 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
LEMD2-207ENST00000508327 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
LEMD2-207ENST00000508327 CUX1P39880 1505 aa21.53■■□□□ 1.04
LEMD2-207ENST00000508327 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
LEMD2-207ENST00000508327 DNAJC5Q9H3Z4 198 aa21.44■■□□□ 1.02
LEMD2-207ENST00000508327 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
LEMD2-207ENST00000508327 FGD5Q6ZNL6 1462 aa21.43■■□□□ 1.02
LEMD2-207ENST00000508327 RAD54L2Q9Y4B4 1467 aa21.41■■□□□ 1.02
LEMD2-207ENST00000508327 ZNF608Q9ULD9 1512 aaPredicted RBP21.41■■□□□ 1.02
LEMD2-207ENST00000508327 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
LEMD2-207ENST00000508327 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
LEMD2-207ENST00000508327 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
LEMD2-207ENST00000508327 SOGA1O94964 1423 aa21.37■■□□□ 1.01
LEMD2-207ENST00000508327 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
LEMD2-207ENST00000508327 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
LEMD2-207ENST00000508327 EIF4G3O43432 1585 aaKnown RBP21.3■■□□□ 1
LEMD2-207ENST00000508327 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 12e-6■■■■□ 24.7
LEMD2-207ENST00000508327 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
LEMD2-207ENST00000508327 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
LEMD2-207ENST00000508327 ABCA10Q8WWZ4 1543 aa21.2■□□□□ 0.98
LEMD2-207ENST00000508327 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
LEMD2-207ENST00000508327 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
LEMD2-207ENST00000508327 PBRM1Q86U86 1689 aa21.1■□□□□ 0.97
LEMD2-207ENST00000508327 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
LEMD2-207ENST00000508327 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.96
LEMD2-207ENST00000508327 CHD1O14646 1710 aa21.04■□□□□ 0.96
LEMD2-207ENST00000508327 FBLN2P98095 1184 aa21.04■□□□□ 0.96
LEMD2-207ENST00000508327 OSCARQ8IYS5 282 aa21.01■□□□□ 0.95
LEMD2-207ENST00000508327 TRIM41Q8WV44 630 aa21■□□□□ 0.95
LEMD2-207ENST00000508327 MAGI1Q96QZ7 1491 aaPredicted RBP20.99■□□□□ 0.95
LEMD2-207ENST00000508327 CHMP7Q8WUX9 453 aaPredicted RBP20.95■□□□□ 0.94
LEMD2-207ENST00000508327 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
LEMD2-207ENST00000508327 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
LEMD2-207ENST00000508327 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
LEMD2-207ENST00000508327 ADAMTS12P58397 1594 aa20.91■□□□□ 0.94
LEMD2-207ENST00000508327 RUSC2Q8N2Y8 1516 aa20.89■□□□□ 0.93
LEMD2-207ENST00000508327 IGF1RP08069 1367 aa20.86■□□□□ 0.93
LEMD2-207ENST00000508327 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
LEMD2-207ENST00000508327 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
LEMD2-207ENST00000508327 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
LEMD2-207ENST00000508327 CUL7Q14999 1698 aa20.77■□□□□ 0.91
LEMD2-207ENST00000508327 CLASP1Q7Z460 1538 aa20.76■□□□□ 0.91
LEMD2-207ENST00000508327 CEP170Q5SW79 1584 aa20.75■□□□□ 0.91
LEMD2-207ENST00000508327 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
LEMD2-207ENST00000508327 NUP160Q12769 1436 aa20.72■□□□□ 0.91
LEMD2-207ENST00000508327 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
LEMD2-207ENST00000508327 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
LEMD2-207ENST00000508327 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
LEMD2-207ENST00000508327 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
LEMD2-207ENST00000508327 FAM9AQ8IZU1 332 aaPredicted RBP20.65■□□□□ 0.9
LEMD2-207ENST00000508327 RAPGEF2Q9Y4G8 1499 aa20.61■□□□□ 0.89
LEMD2-207ENST00000508327 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms