RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 AEBP2Q6ZN18 517 aaPredicted RBP25.93■■□□□ 1.74
SSBP1-211ENST00000484178 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
SSBP1-211ENST00000484178 SENP3Q9H4L4 574 aaPredicted RBP22.18■■□□□ 1.14
SSBP1-211ENST00000484178 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
SSBP1-211ENST00000484178 FOXD1Q16676 465 aa20.62■□□□□ 0.89
SSBP1-211ENST00000484178 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
SSBP1-211ENST00000484178 MSH5O43196 834 aa19.34■□□□□ 0.69
SSBP1-211ENST00000484178 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
SSBP1-211ENST00000484178 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
SSBP1-211ENST00000484178 ADRA2BP18089 450 aa19.19■□□□□ 0.66
SSBP1-211ENST00000484178 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
SSBP1-211ENST00000484178 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
SSBP1-211ENST00000484178 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-211ENST00000484178 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
SSBP1-211ENST00000484178 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
SSBP1-211ENST00000484178 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
SSBP1-211ENST00000484178 HOXD11P31277 338 aaPredicted RBP17■□□□□ 0.31
SSBP1-211ENST00000484178 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
SSBP1-211ENST00000484178 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
SSBP1-211ENST00000484178 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
SSBP1-211ENST00000484178 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
SSBP1-211ENST00000484178 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
SSBP1-211ENST00000484178 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
SSBP1-211ENST00000484178 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
SSBP1-211ENST00000484178 C1QBPQ07021 282 aaKnown RBP16.29■□□□□ 0.2
SSBP1-211ENST00000484178 KCNA4P22459 653 aa16.1■□□□□ 0.17
SSBP1-211ENST00000484178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.165e-6■□□□□ 8.4
SSBP1-211ENST00000484178 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-211ENST00000484178 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
SSBP1-211ENST00000484178 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
SSBP1-211ENST00000484178 CAPN15O75808 1086 aa15.46■□□□□ 0.07
SSBP1-211ENST00000484178 DSG3P32926 999 aa15.44■□□□□ 0.06
SSBP1-211ENST00000484178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
SSBP1-211ENST00000484178 APLP2Q06481 763 aa15.42■□□□□ 0.06
SSBP1-211ENST00000484178 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
SSBP1-211ENST00000484178 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
SSBP1-211ENST00000484178 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
SSBP1-211ENST00000484178 TRHP20396 242 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-211ENST00000484178 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
SSBP1-211ENST00000484178 MYCNP04198 464 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-211ENST00000484178 ABCB7O75027 752 aa15.07■□□□□ 0
SSBP1-211ENST00000484178 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
SSBP1-211ENST00000484178 POLA2Q14181 598 aa14.86□□□□□ -0.03
SSBP1-211ENST00000484178 ZBTB22O15209 634 aa14.8□□□□□ -0.04
SSBP1-211ENST00000484178 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
SSBP1-211ENST00000484178 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
SSBP1-211ENST00000484178 POTEHQ6S545 545 aa14.7□□□□□ -0.06
SSBP1-211ENST00000484178 ATXN8OSP0DMR3 200 aa14.66□□□□□ -0.06
SSBP1-211ENST00000484178 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-211ENST00000484178 AKT1S1Q96B36 256 aa14.43□□□□□ -0.1
SSBP1-211ENST00000484178 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
SSBP1-211ENST00000484178 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
SSBP1-211ENST00000484178 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
SSBP1-211ENST00000484178 FBLN2P98095 1184 aa14.24□□□□□ -0.13
SSBP1-211ENST00000484178 SPDYE2BA6NHP3 402 aa14.18□□□□□ -0.14
SSBP1-211ENST00000484178 SPDYE6P0CI01 402 aa14.18□□□□□ -0.14
SSBP1-211ENST00000484178 SPDYE2Q495Y8 402 aa14.18□□□□□ -0.14
SSBP1-211ENST00000484178 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
SSBP1-211ENST00000484178 MKRN4PQ13434 485 aaPredicted RBP14.14□□□□□ -0.15
SSBP1-211ENST00000484178 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
SSBP1-211ENST00000484178 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
SSBP1-211ENST00000484178 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
SSBP1-211ENST00000484178 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
SSBP1-211ENST00000484178 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
SSBP1-211ENST00000484178 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-211ENST00000484178 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
SSBP1-211ENST00000484178 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
SSBP1-211ENST00000484178 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
SSBP1-211ENST00000484178 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
SSBP1-211ENST00000484178 HAX1O00165 279 aa13.73□□□□□ -0.21
SSBP1-211ENST00000484178 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
SSBP1-211ENST00000484178 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
SSBP1-211ENST00000484178 EVX2Q03828 476 aa13.57□□□□□ -0.24
SSBP1-211ENST00000484178 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
SSBP1-211ENST00000484178 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
SSBP1-211ENST00000484178 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
SSBP1-211ENST00000484178 STAG3Q9UJ98 1225 aa13.46□□□□□ -0.25
SSBP1-211ENST00000484178 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
SSBP1-211ENST00000484178 GABBR2O75899 941 aa13.3□□□□□ -0.28
SSBP1-211ENST00000484178 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
SSBP1-211ENST00000484178 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
SSBP1-211ENST00000484178 PROM2Q8N271 834 aa13.27□□□□□ -0.29
SSBP1-211ENST00000484178 CLCN6P51797 869 aa13.25□□□□□ -0.29
SSBP1-211ENST00000484178 ZNF579Q8NAF0 562 aaKnown RBP13.13□□□□□ -0.31
SSBP1-211ENST00000484178 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
SSBP1-211ENST00000484178 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
SSBP1-211ENST00000484178 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSBP1-211ENST00000484178 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
SSBP1-211ENST00000484178 PAK3O75914 559 aaPredicted RBP13.01□□□□□ -0.33
SSBP1-211ENST00000484178 LHX8Q68G74 356 aa12.94□□□□□ -0.34
SSBP1-211ENST00000484178 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
SSBP1-211ENST00000484178 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-211ENST00000484178 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
SSBP1-211ENST00000484178 PLEKHG5O94827 1062 aa12.86□□□□□ -0.35
SSBP1-211ENST00000484178 MIER1Q8N108 512 aa12.83□□□□□ -0.36
SSBP1-211ENST00000484178 FKBP8Q14318 412 aa12.8□□□□□ -0.36
SSBP1-211ENST00000484178 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
SSBP1-211ENST00000484178 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-211ENST00000484178 MS4A3Q96HJ5 214 aa12.73□□□□□ -0.37
SSBP1-211ENST00000484178 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms