RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
GABRE-207ENST00000476016 CCDC180Q9P1Z9 1646 aa16.67■□□□□ 0.26
GABRE-207ENST00000476016 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
GABRE-207ENST00000476016 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
GABRE-207ENST00000476016 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
GABRE-207ENST00000476016 DCAF1Q9Y4B6 1507 aa15.82■□□□□ 0.12
GABRE-207ENST00000476016 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
GABRE-207ENST00000476016 ABCC9O60706 1549 aa15.66■□□□□ 0.1
GABRE-207ENST00000476016 NACADO15069 1562 aa15.53■□□□□ 0.08
GABRE-207ENST00000476016 DCAF8L2P0C7V8 631 aa15.42■□□□□ 0.06
GABRE-207ENST00000476016 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
GABRE-207ENST00000476016 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
GABRE-207ENST00000476016 SHROOM4Q9ULL8 1493 aa15.12■□□□□ 0.01
GABRE-207ENST00000476016 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
GABRE-207ENST00000476016 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
GABRE-207ENST00000476016 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
GABRE-207ENST00000476016 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.05
GABRE-207ENST00000476016 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
GABRE-207ENST00000476016 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
GABRE-207ENST00000476016 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
GABRE-207ENST00000476016 SMARCA4P51532 1647 aa14.6□□□□□ -0.07
GABRE-207ENST00000476016 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
GABRE-207ENST00000476016 SUPT5HO00267 1087 aaKnown RBP14.51□□□□□ -0.09
GABRE-207ENST00000476016 WIZO95785 1651 aa14.49□□□□□ -0.09
GABRE-207ENST00000476016 EIF4G1Q04637 1599 aaKnown RBP14.47□□□□□ -0.09
GABRE-207ENST00000476016 ATAD2BQ9ULI0 1458 aa14.39□□□□□ -0.11
GABRE-207ENST00000476016 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
GABRE-207ENST00000476016 NCAPD3P42695 1498 aa14.37□□□□□ -0.11
GABRE-207ENST00000476016 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
GABRE-207ENST00000476016 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
GABRE-207ENST00000476016 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
GABRE-207ENST00000476016 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
GABRE-207ENST00000476016 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
GABRE-207ENST00000476016 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
GABRE-207ENST00000476016 PHF23Q9BUL5 403 aaPredicted RBP14.08□□□□□ -0.16
GABRE-207ENST00000476016 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
GABRE-207ENST00000476016 CFTRP13569 1480 aa13.98□□□□□ -0.17
GABRE-207ENST00000476016 PRDM2Q13029 1718 aa13.93□□□□□ -0.18
GABRE-207ENST00000476016 CADPSQ9ULU8 1353 aa13.92□□□□□ -0.18
GABRE-207ENST00000476016 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
GABRE-207ENST00000476016 ABCC8Q09428 1581 aa13.78□□□□□ -0.2
GABRE-207ENST00000476016 NESP48681 1621 aa13.75□□□□□ -0.21
GABRE-207ENST00000476016 WRNQ14191 1432 aaPredicted RBP eCLIP13.75□□□□□ -0.21
GABRE-207ENST00000476016 BIVM-ERCC5R4GMW8 1640 aa13.73□□□□□ -0.21
GABRE-207ENST00000476016 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
GABRE-207ENST00000476016 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
GABRE-207ENST00000476016 SYNJ1O43426 1573 aa13.71□□□□□ -0.21
GABRE-207ENST00000476016 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
GABRE-207ENST00000476016 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
GABRE-207ENST00000476016 CUX1P39880 1505 aa13.68□□□□□ -0.22
GABRE-207ENST00000476016 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
GABRE-207ENST00000476016 CEP164Q9UPV0 1460 aa13.61□□□□□ -0.23
GABRE-207ENST00000476016 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
GABRE-207ENST00000476016 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
GABRE-207ENST00000476016 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
GABRE-207ENST00000476016 EEA1Q15075 1411 aa13.55□□□□□ -0.24
GABRE-207ENST00000476016 SOGA1O94964 1423 aa13.52□□□□□ -0.25
GABRE-207ENST00000476016 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
GABRE-207ENST00000476016 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
GABRE-207ENST00000476016 WDR62O43379 1518 aa13.5□□□□□ -0.25
GABRE-207ENST00000476016 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
GABRE-207ENST00000476016 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
GABRE-207ENST00000476016 THOC2Q8NI27 1593 aaKnown RBP13.47□□□□□ -0.25
GABRE-207ENST00000476016 ABCA10Q8WWZ4 1543 aa13.46□□□□□ -0.25
GABRE-207ENST00000476016 WDR97A6NE52 1622 aa13.45□□□□□ -0.26
GABRE-207ENST00000476016 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
GABRE-207ENST00000476016 CSRNP3Q8WYN3 585 aa13.44□□□□□ -0.26
GABRE-207ENST00000476016 CUX2O14529 1486 aa13.43□□□□□ -0.26
GABRE-207ENST00000476016 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
GABRE-207ENST00000476016 ERCC6Q03468 1493 aa13.4□□□□□ -0.26
GABRE-207ENST00000476016 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
GABRE-207ENST00000476016 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
GABRE-207ENST00000476016 KIF21BO75037 1637 aa13.38□□□□□ -0.27
GABRE-207ENST00000476016 IGF1RP08069 1367 aa13.37□□□□□ -0.27
GABRE-207ENST00000476016 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
GABRE-207ENST00000476016 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
GABRE-207ENST00000476016 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
GABRE-207ENST00000476016 IFT140Q96RY7 1462 aa13.35□□□□□ -0.27
GABRE-207ENST00000476016 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
GABRE-207ENST00000476016 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
GABRE-207ENST00000476016 TNIKQ9UKE5 1360 aa13.28□□□□□ -0.28
GABRE-207ENST00000476016 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
GABRE-207ENST00000476016 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.29
GABRE-207ENST00000476016 CUL7Q14999 1698 aa13.26□□□□□ -0.29
GABRE-207ENST00000476016 RAPGEF2Q9Y4G8 1499 aa13.26□□□□□ -0.29
GABRE-207ENST00000476016 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
GABRE-207ENST00000476016 CARMIL1Q5VZK9 1371 aa13.24□□□□□ -0.29
GABRE-207ENST00000476016 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
GABRE-207ENST00000476016 FOXD1Q16676 465 aa13.22□□□□□ -0.29
GABRE-207ENST00000476016 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.295e-10■■■□□ 18.6
GABRE-207ENST00000476016 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
GABRE-207ENST00000476016 EIF4G3O43432 1585 aaKnown RBP13.2□□□□□ -0.3
GABRE-207ENST00000476016 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
GABRE-207ENST00000476016 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
GABRE-207ENST00000476016 MAGI1Q96QZ7 1491 aaPredicted RBP13.14□□□□□ -0.31
GABRE-207ENST00000476016 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
GABRE-207ENST00000476016 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
GABRE-207ENST00000476016 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.31
GABRE-207ENST00000476016 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
GABRE-207ENST00000476016 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms