RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 NISCHQ9Y2I1 1504 aa34.44■■■■□ 3.1
CALR-207ENST00000590325 CCDC180Q9P1Z9 1646 aa30.43■■■□□ 2.46
CALR-207ENST00000590325 ABCC9O60706 1549 aa29.71■■■□□ 2.35
CALR-207ENST00000590325 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
CALR-207ENST00000590325 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
CALR-207ENST00000590325 NACADO15069 1562 aa28.63■■■□□ 2.17
CALR-207ENST00000590325 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
CALR-207ENST00000590325 MYO15BQ96JP2 1530 aa28.54■■■□□ 2.16
CALR-207ENST00000590325 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
CALR-207ENST00000590325 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
CALR-207ENST00000590325 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
CALR-207ENST00000590325 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
CALR-207ENST00000590325 BICRAQ9NZM4 1560 aa27.76■■■□□ 2.03
CALR-207ENST00000590325 SHROOM4Q9ULL8 1493 aa27.48■■□□□ 1.99
CALR-207ENST00000590325 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
CALR-207ENST00000590325 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.91
CALR-207ENST00000590325 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
CALR-207ENST00000590325 CECR2Q9BXF3 1484 aa26.83■■□□□ 1.89
CALR-207ENST00000590325 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
CALR-207ENST00000590325 SMARCA4P51532 1647 aa26.64■■□□□ 1.85
CALR-207ENST00000590325 MROH2BQ7Z745 1585 aa26.55■■□□□ 1.84
CALR-207ENST00000590325 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
CALR-207ENST00000590325 NCAPD3P42695 1498 aa26.47■■□□□ 1.83
CALR-207ENST00000590325 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
CALR-207ENST00000590325 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
CALR-207ENST00000590325 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
CALR-207ENST00000590325 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
CALR-207ENST00000590325 BAZ1BQ9UIG0 1483 aaKnown RBP26.28■■□□□ 1.8
CALR-207ENST00000590325 WIZO95785 1651 aa26.22■■□□□ 1.79
CALR-207ENST00000590325 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
CALR-207ENST00000590325 SUPT5HO00267 1087 aaKnown RBP25.83■■□□□ 1.73
CALR-207ENST00000590325 NESP48681 1621 aa25.77■■□□□ 1.72
CALR-207ENST00000590325 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
CALR-207ENST00000590325 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
CALR-207ENST00000590325 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
CALR-207ENST00000590325 CFTRP13569 1480 aa25.6■■□□□ 1.69
CALR-207ENST00000590325 ERCC6Q03468 1493 aa25.58■■□□□ 1.69
CALR-207ENST00000590325 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
CALR-207ENST00000590325 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
CALR-207ENST00000590325 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
CALR-207ENST00000590325 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
CALR-207ENST00000590325 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
CALR-207ENST00000590325 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
CALR-207ENST00000590325 CUX2O14529 1486 aa25.24■■□□□ 1.63
CALR-207ENST00000590325 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
CALR-207ENST00000590325 WDR62O43379 1518 aa25.17■■□□□ 1.62
CALR-207ENST00000590325 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
CALR-207ENST00000590325 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
CALR-207ENST00000590325 ABCC8Q09428 1581 aa25■■□□□ 1.59
CALR-207ENST00000590325 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
CALR-207ENST00000590325 CUX1P39880 1505 aa24.89■■□□□ 1.57
CALR-207ENST00000590325 POLA1P09884 1462 aaPredicted RBP24.82■■□□□ 1.56
CALR-207ENST00000590325 WRNQ14191 1432 aaPredicted RBP eCLIP24.81■■□□□ 1.56
CALR-207ENST00000590325 IFT140Q96RY7 1462 aa24.81■■□□□ 1.56
CALR-207ENST00000590325 FGD5Q6ZNL6 1462 aa24.77■■□□□ 1.56
CALR-207ENST00000590325 SOGA1O94964 1423 aa24.73■■□□□ 1.55
CALR-207ENST00000590325 RAD54L2Q9Y4B4 1467 aa24.72■■□□□ 1.55
CALR-207ENST00000590325 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
CALR-207ENST00000590325 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
CALR-207ENST00000590325 TOP2BQ02880 1626 aa24.69■■□□□ 1.54
CALR-207ENST00000590325 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
CALR-207ENST00000590325 BIVM-ERCC5R4GMW8 1640 aa24.65■■□□□ 1.54
CALR-207ENST00000590325 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.535e-11■■■■□ 20.1
CALR-207ENST00000590325 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
CALR-207ENST00000590325 ABCA10Q8WWZ4 1543 aa24.55■■□□□ 1.52
CALR-207ENST00000590325 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
CALR-207ENST00000590325 WDR97A6NE52 1622 aa24.48■■□□□ 1.51
CALR-207ENST00000590325 GAPVD1Q14C86 1478 aa24.44■■□□□ 1.5
CALR-207ENST00000590325 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
CALR-207ENST00000590325 ABCA5Q8WWZ7 1642 aa24.39■■□□□ 1.5
CALR-207ENST00000590325 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
CALR-207ENST00000590325 SNAPC4Q5SXM2 1469 aa24.35■■□□□ 1.49
CALR-207ENST00000590325 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
CALR-207ENST00000590325 MAGI1Q96QZ7 1491 aaPredicted RBP24.31■■□□□ 1.48
CALR-207ENST00000590325 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
CALR-207ENST00000590325 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
CALR-207ENST00000590325 FBLN2P98095 1184 aa24.27■■□□□ 1.48
CALR-207ENST00000590325 PBRM1Q86U86 1689 aa24.25■■□□□ 1.47
CALR-207ENST00000590325 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
CALR-207ENST00000590325 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
CALR-207ENST00000590325 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
CALR-207ENST00000590325 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
CALR-207ENST00000590325 IGF1RP08069 1367 aa24.2■■□□□ 1.46
CALR-207ENST00000590325 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CALR-207ENST00000590325 ADAMTS12P58397 1594 aa24.15■■□□□ 1.46
CALR-207ENST00000590325 CHD1O14646 1710 aa24.14■■□□□ 1.45
CALR-207ENST00000590325 RUSC2Q8N2Y8 1516 aa24.13■■□□□ 1.45
CALR-207ENST00000590325 GRIN2AQ12879 1464 aa24.08■■□□□ 1.45
CALR-207ENST00000590325 CARMIL1Q5VZK9 1371 aa24.04■■□□□ 1.44
CALR-207ENST00000590325 CUL7Q14999 1698 aa24■■□□□ 1.43
CALR-207ENST00000590325 NUP160Q12769 1436 aa23.99■■□□□ 1.43
CALR-207ENST00000590325 CLASP1Q7Z460 1538 aa23.97■■□□□ 1.43
CALR-207ENST00000590325 CEP170Q5SW79 1584 aa23.94■■□□□ 1.42
CALR-207ENST00000590325 EEA1Q15075 1411 aa23.93■■□□□ 1.42
CALR-207ENST00000590325 CSRNP3Q8WYN3 585 aa23.92■■□□□ 1.42
CALR-207ENST00000590325 RAPGEF2Q9Y4G8 1499 aa23.89■■□□□ 1.42
CALR-207ENST00000590325 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
CALR-207ENST00000590325 PRXQ9BXM0 1461 aa23.87■■□□□ 1.41
CALR-207ENST00000590325 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
CALR-207ENST00000590325 KIAA0586Q9BVV6 1533 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms