Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
SPTLC2O15270 AC022211.4-201ENST00000625094 2161 ntBASIC27.43■■□□□ 1.98
SPTLC2O15270 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SPTLC2O15270 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
SPTLC2O15270 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.42■■□□□ 1.98
SPTLC2O15270 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.42■■□□□ 1.98
SPTLC2O15270 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
SPTLC2O15270 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SPTLC2O15270 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SPTLC2O15270 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPTLC2O15270 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.41■■□□□ 1.98
SPTLC2O15270 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.41■■□□□ 1.98
SPTLC2O15270 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SPTLC2O15270 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPTLC2O15270 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPTLC2O15270 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.4■■□□□ 1.98
SPTLC2O15270 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPTLC2O15270 MIR639-201ENST00000384974 98 ntBASIC27.4■■□□□ 1.98
SPTLC2O15270 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.4■■□□□ 1.98
SPTLC2O15270 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SPTLC2O15270 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SPTLC2O15270 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPTLC2O15270 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC27.39■■□□□ 1.98
SPTLC2O15270 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SPTLC2O15270 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC27.38■■□□□ 1.97
SPTLC2O15270 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SPTLC2O15270 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SPTLC2O15270 AC025884.2-201ENST00000553429 711 ntBASIC27.38■■□□□ 1.97
SPTLC2O15270 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.38■■□□□ 1.97
SPTLC2O15270 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SPTLC2O15270 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SPTLC2O15270 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SPTLC2O15270 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.37■■□□□ 1.97
SPTLC2O15270 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SPTLC2O15270 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.36■■□□□ 1.97
SPTLC2O15270 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPTLC2O15270 AC138932.3-201ENST00000567634 1902 ntBASIC27.36■■□□□ 1.97
SPTLC2O15270 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPTLC2O15270 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SPTLC2O15270 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.36■■□□□ 1.97
SPTLC2O15270 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
SPTLC2O15270 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.36■■□□□ 1.97
SPTLC2O15270 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
SPTLC2O15270 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPTLC2O15270 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SPTLC2O15270 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
SPTLC2O15270 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SPTLC2O15270 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPTLC2O15270 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.34■■□□□ 1.97
SPTLC2O15270 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SPTLC2O15270 AC093323.1-202ENST00000635031 2045 ntBASIC27.33■■□□□ 1.97
SPTLC2O15270 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SPTLC2O15270 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
SPTLC2O15270 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SPTLC2O15270 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
SPTLC2O15270 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.96
SPTLC2O15270 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPTLC2O15270 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.32■■□□□ 1.96
SPTLC2O15270 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.32■■□□□ 1.96
SPTLC2O15270 AC092296.2-201ENST00000589470 999 ntBASIC27.32■■□□□ 1.96
SPTLC2O15270 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.32■■□□□ 1.96
SPTLC2O15270 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPTLC2O15270 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPTLC2O15270 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPTLC2O15270 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
SPTLC2O15270 AC097639.1-201ENST00000565519 1891 ntBASIC27.32■■□□□ 1.96
SPTLC2O15270 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPTLC2O15270 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.31■■□□□ 1.96
SPTLC2O15270 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
SPTLC2O15270 SMPD5-203ENST00000639008 1464 ntBASIC27.3■■□□□ 1.96
SPTLC2O15270 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.29■■□□□ 1.96
SPTLC2O15270 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPTLC2O15270 MIR3960-201ENST00000583311 91 ntBASIC27.29■■□□□ 1.96
SPTLC2O15270 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPTLC2O15270 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.28■■□□□ 1.96
SPTLC2O15270 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPTLC2O15270 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPTLC2O15270 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.28■■□□□ 1.96
SPTLC2O15270 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPTLC2O15270 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.28■■□□□ 1.96
SPTLC2O15270 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPTLC2O15270 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.27■■□□□ 1.96
SPTLC2O15270 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
SPTLC2O15270 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SPTLC2O15270 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPTLC2O15270 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
SPTLC2O15270 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.26■■□□□ 1.95
SPTLC2O15270 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPTLC2O15270 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
SPTLC2O15270 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SPTLC2O15270 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.25■■□□□ 1.95
SPTLC2O15270 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPTLC2O15270 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms