Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM3Q9BZL3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMIM3Q9BZL3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.65■□□□□ 0.74
SMIM3Q9BZL3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMIM3Q9BZL3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMIM3Q9BZL3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.64■□□□□ 0.74
SMIM3Q9BZL3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.64■□□□□ 0.73
SMIM3Q9BZL3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.63■□□□□ 0.73
SMIM3Q9BZL3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMIM3Q9BZL3 AC068473.5-201ENST00000616428 2072 ntBASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMIM3Q9BZL3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMIM3Q9BZL3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.59■□□□□ 0.73
SMIM3Q9BZL3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM3Q9BZL3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMIM3Q9BZL3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.59■□□□□ 0.73
SMIM3Q9BZL3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM3Q9BZL3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM3Q9BZL3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMIM3Q9BZL3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM3Q9BZL3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMIM3Q9BZL3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.57■□□□□ 0.72
SMIM3Q9BZL3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 LINC01124-201ENST00000409786 2117 ntBASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMIM3Q9BZL3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMIM3Q9BZL3 WHAMMP3-201ENST00000611636 1609 ntBASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 SETD8P1-201ENST00000623146 1180 ntBASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMIM3Q9BZL3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMIM3Q9BZL3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.52■□□□□ 0.72
SMIM3Q9BZL3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMIM3Q9BZL3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SMIM3Q9BZL3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms