RNA–Protein interactions for RNA: ENST00000360998.3

STRBP-202, Transcript of spermatid perinuclear RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene STRBP, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRBP-202ENST00000360998 NISCHQ9Y2I1 1504 aa44.81■■■■■ 4.76
STRBP-202ENST00000360998 SHROOM4Q9ULL8 1493 aa38.89■■■■□ 3.82
STRBP-202ENST00000360998 SUPT5HO00267 1087 aaKnown RBP38.33■■■■□ 3.73
STRBP-202ENST00000360998 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
STRBP-202ENST00000360998 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.62
STRBP-202ENST00000360998 MYO15BQ96JP2 1530 aa37.41■■■■□ 3.58
STRBP-202ENST00000360998 DCAF8L2P0C7V8 631 aa37.4■■■■□ 3.58
STRBP-202ENST00000360998 CHIC1Q5VXU3 224 aa37.36■■■■□ 3.57
STRBP-202ENST00000360998 HRCP23327 699 aa36.95■■■■□ 3.51
STRBP-202ENST00000360998 PCGF6Q9BYE7 350 aa36.77■■■■□ 3.48
STRBP-202ENST00000360998 DCAF1Q9Y4B6 1507 aa36.56■■■■□ 3.44
STRBP-202ENST00000360998 LOC105371045A0A1W2PR82 267 aa36.45■■■■□ 3.42
STRBP-202ENST00000360998 PPARGC1BQ86YN6 1023 aaKnown RBP36.36■■■■□ 3.41
STRBP-202ENST00000360998 ABCC9O60706 1549 aa35.89■■■■□ 3.34
STRBP-202ENST00000360998 TRIM26Q12899 539 aaPredicted RBP35.79■■■■□ 3.32
STRBP-202ENST00000360998 RSF1Q96T23 1441 aaPredicted RBP35.72■■■■□ 3.31
STRBP-202ENST00000360998 SCRIBQ14160 1630 aa35.71■■■■□ 3.31
STRBP-202ENST00000360998 TRIM41Q8WV44 630 aa35.53■■■■□ 3.28
STRBP-202ENST00000360998 FAM9AQ8IZU1 332 aaPredicted RBP35.46■■■■□ 3.27
STRBP-202ENST00000360998 RB1CC1Q8TDY2 1594 aa35.45■■■■□ 3.27
STRBP-202ENST00000360998 EHMT2Q96KQ7 1210 aa35.31■■■■□ 3.24
STRBP-202ENST00000360998 CECR2Q9BXF3 1484 aa35.1■■■■□ 3.21
STRBP-202ENST00000360998 ZEB1P37275 1124 aaPredicted RBP35.06■■■■□ 3.2
STRBP-202ENST00000360998 MROH2BQ7Z745 1585 aa34.97■■■■□ 3.19
STRBP-202ENST00000360998 WIZO95785 1651 aa34.82■■■■□ 3.17
STRBP-202ENST00000360998 NACADO15069 1562 aa34.8■■■■□ 3.16
STRBP-202ENST00000360998 BAZ1AQ9NRL2 1556 aaPredicted RBP34.48■■■■□ 3.11
STRBP-202ENST00000360998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.46■■■■□ 3.11
STRBP-202ENST00000360998 SCAF1Q9H7N4 1312 aaKnown RBP34.44■■■■□ 3.1
STRBP-202ENST00000360998 EIF4G1Q04637 1599 aaKnown RBP34.42■■■■□ 3.1
STRBP-202ENST00000360998 CCER1Q8TC90 406 aaPredicted RBP34.29■■■■□ 3.08
STRBP-202ENST00000360998 ABCC8Q09428 1581 aa34.27■■■■□ 3.08
STRBP-202ENST00000360998 TTBK1Q5TCY1 1321 aaPredicted RBP34.24■■■■□ 3.07
STRBP-202ENST00000360998 CCDC88BA6NC98 1476 aa34.21■■■■□ 3.07
STRBP-202ENST00000360998 TOP2AP11388 1531 aaKnown RBP34.12■■■■□ 3.05
STRBP-202ENST00000360998 SOGA1O94964 1423 aa34.04■■■■□ 3.04
STRBP-202ENST00000360998 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
STRBP-202ENST00000360998 SMARCA2P51531 1590 aa34.02■■■■□ 3.04
STRBP-202ENST00000360998 CEP162Q5TB80 1403 aa34.01■■■■□ 3.03
STRBP-202ENST00000360998 WRNQ14191 1432 aaPredicted RBP eCLIP33.97■■■■□ 3.03
STRBP-202ENST00000360998 RUSC2Q8N2Y8 1516 aa33.9■■■■□ 3.02
STRBP-202ENST00000360998 PELP1Q8IZL8 1130 aaKnown RBP33.9■■■■□ 3.02
STRBP-202ENST00000360998 NEUROD1Q13562 356 aa33.87■■■■□ 3.01
STRBP-202ENST00000360998 ACIN1Q9UKV3 1341 aaKnown RBP33.86■■■■□ 3.01
STRBP-202ENST00000360998 DIEXFQ68CQ4 756 aaKnown RBP33.86■■■■□ 3.01
STRBP-202ENST00000360998 TNIKQ9UKE5 1360 aa33.85■■■■□ 3.01
STRBP-202ENST00000360998 UNC13AQ9UPW8 1703 aa33.82■■■■□ 3.01
STRBP-202ENST00000360998 UBTFP17480 764 aaKnown RBP33.82■■■■□ 3
STRBP-202ENST00000360998 CSRNP3Q8WYN3 585 aa33.82■■■■□ 3
STRBP-202ENST00000360998 EEA1Q15075 1411 aa33.64■■■□□ 2.98
STRBP-202ENST00000360998 PABPN1Q86U42 306 aaKnown RBP eCLIP33.61■■■□□ 2.97
STRBP-202ENST00000360998 GTF3C3Q9Y5Q9 886 aa33.56■■■□□ 2.96
STRBP-202ENST00000360998 GOLGA3Q08378 1498 aa33.56■■■□□ 2.96
STRBP-202ENST00000360998 CENPBP07199 599 aaPredicted RBP33.49■■■□□ 2.95
STRBP-202ENST00000360998 ZNF316A6NFI3 1004 aaPredicted RBP33.45■■■□□ 2.94
STRBP-202ENST00000360998 HNRNPUL2Q1KMD3 747 aaKnown RBP33.42■■■□□ 2.94
STRBP-202ENST00000360998 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
STRBP-202ENST00000360998 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
STRBP-202ENST00000360998 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
STRBP-202ENST00000360998 CLIP1P30622 1438 aa33.27■■■□□ 2.92
STRBP-202ENST00000360998 RANGAP1P46060 587 aaPredicted RBP33.24■■■□□ 2.91
STRBP-202ENST00000360998 YTHDC1Q96MU7 727 aaKnown RBP33.24■■■□□ 2.91
STRBP-202ENST00000360998 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
STRBP-202ENST00000360998 KIF21BO75037 1637 aa33.23■■■□□ 2.91
STRBP-202ENST00000360998 MIER1Q8N108 512 aa33.15■■■□□ 2.9
STRBP-202ENST00000360998 RAPGEF2Q9Y4G8 1499 aa33.15■■■□□ 2.9
STRBP-202ENST00000360998 VPS8Q8N3P4 1428 aa33.13■■■□□ 2.89
STRBP-202ENST00000360998 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
STRBP-202ENST00000360998 APLP2Q06481 763 aa33.06■■■□□ 2.88
STRBP-202ENST00000360998 BAZ1BQ9UIG0 1483 aaKnown RBP33.01■■■□□ 2.88
STRBP-202ENST00000360998 TOP2BQ02880 1626 aa32.81■■■□□ 2.84
STRBP-202ENST00000360998 KANK4Q5T7N3 995 aaPredicted RBP32.73■■■□□ 2.83
STRBP-202ENST00000360998 ARAP1Q96P48 1450 aa32.69■■■□□ 2.82
STRBP-202ENST00000360998 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
STRBP-202ENST00000360998 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
STRBP-202ENST00000360998 PRXQ9BXM0 1461 aa32.65■■■□□ 2.82
STRBP-202ENST00000360998 ERICH3Q5RHP9 1530 aa32.59■■■□□ 2.81
STRBP-202ENST00000360998 CLSPNQ9HAW4 1339 aa32.52■■■□□ 2.8
STRBP-202ENST00000360998 CUX1P39880 1505 aa32.49■■■□□ 2.79
STRBP-202ENST00000360998 RRBP1Q9P2E9 1410 aaKnown RBP32.41■■■□□ 2.78
STRBP-202ENST00000360998 ITGAEP38570 1179 aa32.41■■■□□ 2.78
STRBP-202ENST00000360998 KIF27Q86VH2 1401 aa32.39■■■□□ 2.78
STRBP-202ENST00000360998 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
STRBP-202ENST00000360998 CCNB3Q8WWL7 1395 aa32.31■■■□□ 2.76
STRBP-202ENST00000360998 NCAPD3P42695 1498 aa32.28■■■□□ 2.76
STRBP-202ENST00000360998 HMGXB3Q12766 1538 aa32.24■■■□□ 2.75
STRBP-202ENST00000360998 CUX2O14529 1486 aa32.23■■■□□ 2.75
STRBP-202ENST00000360998 SUPT16HQ9Y5B9 1047 aaKnown RBP32.19■■■□□ 2.74
STRBP-202ENST00000360998 CFTRP13569 1480 aa32.19■■■□□ 2.74
STRBP-202ENST00000360998 MYT1Q01538 1121 aa32.17■■■□□ 2.74
STRBP-202ENST00000360998 RAB3GAP2Q9H2M9 1393 aa32.14■■■□□ 2.74
STRBP-202ENST00000360998 KCNH8Q96L42 1107 aa32.11■■■□□ 2.73
STRBP-202ENST00000360998 IGF1RP08069 1367 aa32.08■■■□□ 2.73
STRBP-202ENST00000360998 MAPKBP1O60336 1514 aa32.06■■■□□ 2.72
STRBP-202ENST00000360998 TIAM1Q13009 1591 aa32■■■□□ 2.71
STRBP-202ENST00000360998 SIN3AQ96ST3 1273 aa31.96■■■□□ 2.71
STRBP-202ENST00000360998 PHLDB1Q86UU1 1377 aa31.95■■■□□ 2.71
STRBP-202ENST00000360998 CARMIL1Q5VZK9 1371 aa31.94■■■□□ 2.7
STRBP-202ENST00000360998 P3H3Q8IVL6 736 aa31.93■■■□□ 2.7
STRBP-202ENST00000360998 SETD5Q9C0A6 1442 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms