Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC9CQ8N5M4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC9CQ8N5M4 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.08■□□□□ 0.65
TTC9CQ8N5M4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.08■□□□□ 0.65
TTC9CQ8N5M4 MIR3960-201ENST00000583311 91 ntBASIC19.08■□□□□ 0.64
TTC9CQ8N5M4 AC010501.1-201ENST00000606270 1962 ntBASIC19.08■□□□□ 0.64
TTC9CQ8N5M4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.08■□□□□ 0.64
TTC9CQ8N5M4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TTC9CQ8N5M4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC9CQ8N5M4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC9CQ8N5M4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC9CQ8N5M4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.07■□□□□ 0.64
TTC9CQ8N5M4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC9CQ8N5M4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.06■□□□□ 0.64
TTC9CQ8N5M4 ERN1-208ENST00000606895 2068 ntBASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 GPX1-201ENST00000419349 1106 ntBASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TTC9CQ8N5M4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TTC9CQ8N5M4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TTC9CQ8N5M4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TTC9CQ8N5M4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC9CQ8N5M4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC9CQ8N5M4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TTC9CQ8N5M4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TTC9CQ8N5M4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TTC9CQ8N5M4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.02■□□□□ 0.63
TTC9CQ8N5M4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TTC9CQ8N5M4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TTC9CQ8N5M4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TTC9CQ8N5M4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TTC9CQ8N5M4 RP9P-202ENST00000450133 1212 ntBASIC18.99■□□□□ 0.63
TTC9CQ8N5M4 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.99■□□□□ 0.63
TTC9CQ8N5M4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.99■□□□□ 0.63
TTC9CQ8N5M4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
TTC9CQ8N5M4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.98■□□□□ 0.63
TTC9CQ8N5M4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TTC9CQ8N5M4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 AC007029.1-201ENST00000604183 313 ntBASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TTC9CQ8N5M4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.96■□□□□ 0.63
TTC9CQ8N5M4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms