Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AC068473.5-201ENST00000616428 2072 ntBASIC21.75■■□□□ 1.07
ZNF404Q494X3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF404Q494X3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF404Q494X3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF404Q494X3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF404Q494X3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF404Q494X3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZNF404Q494X3 AC138932.3-201ENST00000567634 1902 ntBASIC21.74■■□□□ 1.07
ZNF404Q494X3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF404Q494X3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ZNF404Q494X3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.73■■□□□ 1.07
ZNF404Q494X3 MIR7108-201ENST00000614319 87 ntBASIC21.73■■□□□ 1.07
ZNF404Q494X3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF404Q494X3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.72■■□□□ 1.07
ZNF404Q494X3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.72■■□□□ 1.07
ZNF404Q494X3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ZNF404Q494X3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.72■■□□□ 1.07
ZNF404Q494X3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF404Q494X3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF404Q494X3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF404Q494X3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF404Q494X3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.71■■□□□ 1.07
ZNF404Q494X3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF404Q494X3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF404Q494X3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ZNF404Q494X3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ZNF404Q494X3 AC022211.4-201ENST00000625094 2161 ntBASIC21.7■■□□□ 1.06
ZNF404Q494X3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.7■■□□□ 1.06
ZNF404Q494X3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.7■■□□□ 1.06
ZNF404Q494X3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.7■■□□□ 1.06
ZNF404Q494X3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.7■■□□□ 1.06
ZNF404Q494X3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF404Q494X3 LINC00273-201ENST00000539813 1452 ntBASIC21.7■■□□□ 1.06
ZNF404Q494X3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
ZNF404Q494X3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.69■■□□□ 1.06
ZNF404Q494X3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.69■■□□□ 1.06
ZNF404Q494X3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ZNF404Q494X3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF404Q494X3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF404Q494X3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.68■■□□□ 1.06
ZNF404Q494X3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.68■■□□□ 1.06
ZNF404Q494X3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ZNF404Q494X3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.67■■□□□ 1.06
ZNF404Q494X3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF404Q494X3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF404Q494X3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ZNF404Q494X3 LINC01971-201ENST00000617888 1048 ntBASIC21.67■■□□□ 1.06
ZNF404Q494X3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF404Q494X3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ZNF404Q494X3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF404Q494X3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF404Q494X3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.65■■□□□ 1.06
ZNF404Q494X3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF404Q494X3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF404Q494X3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF404Q494X3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF404Q494X3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.64■■□□□ 1.06
ZNF404Q494X3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.64■■□□□ 1.06
ZNF404Q494X3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF404Q494X3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.64■■□□□ 1.05
ZNF404Q494X3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF404Q494X3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF404Q494X3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.64■■□□□ 1.05
ZNF404Q494X3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF404Q494X3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF404Q494X3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF404Q494X3 AC010501.1-201ENST00000606270 1962 ntBASIC21.63■■□□□ 1.05
ZNF404Q494X3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.63■■□□□ 1.05
ZNF404Q494X3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ZNF404Q494X3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF404Q494X3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF404Q494X3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.63■■□□□ 1.05
ZNF404Q494X3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.63■■□□□ 1.05
ZNF404Q494X3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.63■■□□□ 1.05
ZNF404Q494X3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF404Q494X3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF404Q494X3 CLDN5-201ENST00000403084 2357 ntBASIC21.62■■□□□ 1.05
ZNF404Q494X3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.61■■□□□ 1.05
ZNF404Q494X3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ZNF404Q494X3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZNF404Q494X3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF404Q494X3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms