RNA–Protein interactions for RNA: ENST00000598913.5

SAMD4B-208, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SAMD4B, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-208ENST00000598913 NISCHQ9Y2I1 1504 aa46.34■■■■■ 5.01
SAMD4B-208ENST00000598913 SHROOM4Q9ULL8 1493 aa40.69■■■■■ 4.1
SAMD4B-208ENST00000598913 SUPT5HO00267 1087 aaKnown RBP39.92■■■■□ 3.98
SAMD4B-208ENST00000598913 DCAF8L2P0C7V8 631 aa39.62■■■■□ 3.93
SAMD4B-208ENST00000598913 ZCCHC6Q5VYS8 1495 aaKnown RBP39.12■■■■□ 3.85
SAMD4B-208ENST00000598913 CCDC180Q9P1Z9 1646 aa38.81■■■■□ 3.8
SAMD4B-208ENST00000598913 CHIC1Q5VXU3 224 aa38.42■■■■□ 3.74
SAMD4B-208ENST00000598913 MYO15BQ96JP2 1530 aa38.39■■■■□ 3.74
SAMD4B-208ENST00000598913 LOC105371045A0A1W2PR82 267 aa37.75■■■■□ 3.63
SAMD4B-208ENST00000598913 PCGF6Q9BYE7 350 aa37.71■■■■□ 3.63
SAMD4B-208ENST00000598913 DCAF1Q9Y4B6 1507 aa37.47■■■■□ 3.59
SAMD4B-208ENST00000598913 HRCP23327 699 aa37.35■■■■□ 3.57
SAMD4B-208ENST00000598913 SCRIBQ14160 1630 aa37.25■■■■□ 3.55
SAMD4B-208ENST00000598913 PPARGC1BQ86YN6 1023 aaKnown RBP37.24■■■■□ 3.55
SAMD4B-208ENST00000598913 EHMT2Q96KQ7 1210 aa37.19■■■■□ 3.54
SAMD4B-208ENST00000598913 FAM9AQ8IZU1 332 aaPredicted RBP37.07■■■■□ 3.52
SAMD4B-208ENST00000598913 ABCC9O60706 1549 aa36.94■■■■□ 3.5
SAMD4B-208ENST00000598913 RSF1Q96T23 1441 aaPredicted RBP36.94■■■■□ 3.5
SAMD4B-208ENST00000598913 TRIM41Q8WV44 630 aa36.8■■■■□ 3.48
SAMD4B-208ENST00000598913 RB1CC1Q8TDY2 1594 aa36.65■■■■□ 3.46
SAMD4B-208ENST00000598913 CECR2Q9BXF3 1484 aa36.6■■■■□ 3.45
SAMD4B-208ENST00000598913 TRIM26Q12899 539 aaPredicted RBP36.45■■■■□ 3.42
SAMD4B-208ENST00000598913 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
SAMD4B-208ENST00000598913 WIZO95785 1651 aa36.12■■■■□ 3.37
SAMD4B-208ENST00000598913 NACADO15069 1562 aa36.05■■■■□ 3.36
SAMD4B-208ENST00000598913 TTBK1Q5TCY1 1321 aaPredicted RBP35.91■■■■□ 3.34
SAMD4B-208ENST00000598913 PABPN1Q86U42 306 aaKnown RBP eCLIP35.71■■■■□ 3.31
SAMD4B-208ENST00000598913 ABCC8Q09428 1581 aa35.57■■■■□ 3.28
SAMD4B-208ENST00000598913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.52■■■■□ 3.28
SAMD4B-208ENST00000598913 BAZ1AQ9NRL2 1556 aaPredicted RBP35.48■■■■□ 3.27
SAMD4B-208ENST00000598913 CCDC88BA6NC98 1476 aa35.42■■■■□ 3.26
SAMD4B-208ENST00000598913 ZEB1P37275 1124 aaPredicted RBP35.35■■■■□ 3.25
SAMD4B-208ENST00000598913 SOGA1O94964 1423 aa35.29■■■■□ 3.24
SAMD4B-208ENST00000598913 EIF4G1Q04637 1599 aaKnown RBP35.26■■■■□ 3.23
SAMD4B-208ENST00000598913 SMARCA4P51532 1647 aa35.23■■■■□ 3.23
SAMD4B-208ENST00000598913 CCER1Q8TC90 406 aaPredicted RBP35.21■■■■□ 3.23
SAMD4B-208ENST00000598913 RUSC2Q8N2Y8 1516 aa35.19■■■■□ 3.22
SAMD4B-208ENST00000598913 TOP2AP11388 1531 aaKnown RBP35.19■■■■□ 3.22
SAMD4B-208ENST00000598913 UBTFP17480 764 aaKnown RBP35.18■■■■□ 3.22
SAMD4B-208ENST00000598913 UNC13AQ9UPW8 1703 aa35.17■■■■□ 3.22
SAMD4B-208ENST00000598913 SMARCA2P51531 1590 aa35.14■■■■□ 3.22
SAMD4B-208ENST00000598913 RANGAP1P46060 587 aaPredicted RBP35.06■■■■□ 3.2
SAMD4B-208ENST00000598913 CEP162Q5TB80 1403 aa34.98■■■■□ 3.19
SAMD4B-208ENST00000598913 CSRNP3Q8WYN3 585 aa34.97■■■■□ 3.19
SAMD4B-208ENST00000598913 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
SAMD4B-208ENST00000598913 SCAF1Q9H7N4 1312 aaKnown RBP34.75■■■■□ 3.15
SAMD4B-208ENST00000598913 TNIKQ9UKE5 1360 aa34.69■■■■□ 3.14
SAMD4B-208ENST00000598913 WRNQ14191 1432 aaPredicted RBP eCLIP34.68■■■■□ 3.14
SAMD4B-208ENST00000598913 HNRNPUL2Q1KMD3 747 aaKnown RBP34.66■■■■□ 3.14
SAMD4B-208ENST00000598913 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
SAMD4B-208ENST00000598913 DIEXFQ68CQ4 756 aaKnown RBP34.47■■■■□ 3.11
SAMD4B-208ENST00000598913 GOLGA3Q08378 1498 aa34.47■■■■□ 3.11
SAMD4B-208ENST00000598913 ATAD2BQ9ULI0 1458 aa34.44■■■■□ 3.1
SAMD4B-208ENST00000598913 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
SAMD4B-208ENST00000598913 EEA1Q15075 1411 aa34.37■■■■□ 3.09
SAMD4B-208ENST00000598913 NEUROD1Q13562 356 aa34.37■■■■□ 3.09
SAMD4B-208ENST00000598913 RAPGEF2Q9Y4G8 1499 aa34.3■■■■□ 3.08
SAMD4B-208ENST00000598913 CLIP1P30622 1438 aa34.3■■■■□ 3.08
SAMD4B-208ENST00000598913 CEP164Q9UPV0 1460 aa34.21■■■■□ 3.07
SAMD4B-208ENST00000598913 PEG3Q9GZU2 1588 aa34.2■■■■□ 3.07
SAMD4B-208ENST00000598913 APLP2Q06481 763 aa34.18■■■■□ 3.06
SAMD4B-208ENST00000598913 YTHDC1Q96MU7 727 aaKnown RBP34.17■■■■□ 3.06
SAMD4B-208ENST00000598913 ACIN1Q9UKV3 1341 aaKnown RBP34.15■■■■□ 3.06
SAMD4B-208ENST00000598913 ZNF316A6NFI3 1004 aaPredicted RBP34.04■■■■□ 3.04
SAMD4B-208ENST00000598913 GTF3C3Q9Y5Q9 886 aa34.01■■■■□ 3.04
SAMD4B-208ENST00000598913 VPS8Q8N3P4 1428 aa34■■■■□ 3.03
SAMD4B-208ENST00000598913 KIF21BO75037 1637 aa33.97■■■■□ 3.03
SAMD4B-208ENST00000598913 KANK4Q5T7N3 995 aaPredicted RBP33.95■■■■□ 3.03
SAMD4B-208ENST00000598913 MIER1Q8N108 512 aa33.88■■■■□ 3.01
SAMD4B-208ENST00000598913 ITGAEP38570 1179 aa33.87■■■■□ 3.01
SAMD4B-208ENST00000598913 TOP2BQ02880 1626 aa33.79■■■■□ 3
SAMD4B-208ENST00000598913 CENPBP07199 599 aaPredicted RBP33.78■■■■□ 3
SAMD4B-208ENST00000598913 CUX1P39880 1505 aa33.71■■■□□ 2.99
SAMD4B-208ENST00000598913 ARAP1Q96P48 1450 aa33.65■■■□□ 2.98
SAMD4B-208ENST00000598913 PRXQ9BXM0 1461 aa33.62■■■□□ 2.97
SAMD4B-208ENST00000598913 P3H3Q8IVL6 736 aa33.56■■■□□ 2.96
SAMD4B-208ENST00000598913 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
SAMD4B-208ENST00000598913 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
SAMD4B-208ENST00000598913 KIF27Q86VH2 1401 aa33.51■■■□□ 2.96
SAMD4B-208ENST00000598913 ATP1B4Q9UN42 357 aaPredicted RBP33.5■■■□□ 2.95
SAMD4B-208ENST00000598913 DHX57Q6P158 1386 aaKnown RBP33.45■■■□□ 2.95
SAMD4B-208ENST00000598913 CFTRP13569 1480 aa33.4■■■□□ 2.94
SAMD4B-208ENST00000598913 CUX2O14529 1486 aa33.39■■■□□ 2.94
SAMD4B-208ENST00000598913 ARHGAP35Q9NRY4 1499 aa33.37■■■□□ 2.93
SAMD4B-208ENST00000598913 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
SAMD4B-208ENST00000598913 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
SAMD4B-208ENST00000598913 IGF1RP08069 1367 aa33.3■■■□□ 2.92
SAMD4B-208ENST00000598913 PELP1Q8IZL8 1130 aaKnown RBP33.27■■■□□ 2.92
SAMD4B-208ENST00000598913 FAM50AQ14320 339 aaKnown RBP33.22■■■□□ 2.91
SAMD4B-208ENST00000598913 CCNB3Q8WWL7 1395 aa33.21■■■□□ 2.91
SAMD4B-208ENST00000598913 CARMIL1Q5VZK9 1371 aa33.17■■■□□ 2.9
SAMD4B-208ENST00000598913 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.9
SAMD4B-208ENST00000598913 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
SAMD4B-208ENST00000598913 RRBP1Q9P2E9 1410 aaKnown RBP33.12■■■□□ 2.89
SAMD4B-208ENST00000598913 SIN3AQ96ST3 1273 aa33.09■■■□□ 2.89
SAMD4B-208ENST00000598913 KCNH8Q96L42 1107 aa33.07■■■□□ 2.88
SAMD4B-208ENST00000598913 RAB3GAP2Q9H2M9 1393 aa33.06■■■□□ 2.88
SAMD4B-208ENST00000598913 HIRIP3Q9BW71 556 aaPredicted RBP33.05■■■□□ 2.88
SAMD4B-208ENST00000598913 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
SAMD4B-208ENST00000598913 PHLDB1Q86UU1 1377 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms