Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HIST1H3AP68431 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST1H3AP68431 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H3AP68431 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
HIST1H3AP68431 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H3AP68431 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H3AP68431 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.18■□□□□ 0.98
HIST1H3AP68431 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIST1H3AP68431 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HIST1H3AP68431 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H3AP68431 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H3AP68431 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST1H3AP68431 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.17■□□□□ 0.98
HIST1H3AP68431 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST1H3AP68431 SMPD5-203ENST00000639008 1464 ntBASIC21.17■□□□□ 0.98
HIST1H3AP68431 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.17■□□□□ 0.98
HIST1H3AP68431 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H3AP68431 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HIST1H3AP68431 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H3AP68431 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HIST1H3AP68431 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HIST1H3AP68431 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HIST1H3AP68431 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H3AP68431 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H3AP68431 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H3AP68431 MIR3960-201ENST00000583311 91 ntBASIC21.15■□□□□ 0.98
HIST1H3AP68431 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H3AP68431 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HIST1H3AP68431 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HIST1H3AP68431 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HIST1H3AP68431 AC096887.2-201ENST00000623443 1957 ntBASIC21.14■□□□□ 0.98
HIST1H3AP68431 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST1H3AP68431 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H3AP68431 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.14■□□□□ 0.97
HIST1H3AP68431 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H3AP68431 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H3AP68431 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H3AP68431 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H3AP68431 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.13■□□□□ 0.97
HIST1H3AP68431 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H3AP68431 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.13■□□□□ 0.97
HIST1H3AP68431 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST1H3AP68431 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H3AP68431 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H3AP68431 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST1H3AP68431 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H3AP68431 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
HIST1H3AP68431 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST1H3AP68431 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H3AP68431 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HIST1H3AP68431 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H3AP68431 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H3AP68431 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HIST1H3AP68431 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H3AP68431 AC020928.2-201ENST00000588717 2197 ntBASIC21.11■□□□□ 0.97
HIST1H3AP68431 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H3AP68431 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HIST1H3AP68431 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H3AP68431 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H3AP68431 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST1H3AP68431 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HIST1H3AP68431 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H3AP68431 GPX1-201ENST00000419349 1106 ntBASIC21.09■□□□□ 0.97
HIST1H3AP68431 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.09■□□□□ 0.97
HIST1H3AP68431 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST1H3AP68431 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H3AP68431 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST1H3AP68431 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H3AP68431 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H3AP68431 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HIST1H3AP68431 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H3AP68431 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HIST1H3AP68431 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
HIST1H3AP68431 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H3AP68431 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HIST1H3AP68431 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.07■□□□□ 0.96
HIST1H3AP68431 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.06■□□□□ 0.96
HIST1H3AP68431 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 RP9P-202ENST00000450133 1212 ntBASIC21.06■□□□□ 0.96
HIST1H3AP68431 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.06■□□□□ 0.96
HIST1H3AP68431 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HIST1H3AP68431 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H3AP68431 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H3AP68431 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST1H3AP68431 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
HIST1H3AP68431 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.05■□□□□ 0.96
HIST1H3AP68431 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H3AP68431 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H3AP68431 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HIST1H3AP68431 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H3AP68431 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
HIST1H3AP68431 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.04■□□□□ 0.96
HIST1H3AP68431 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HIST1H3AP68431 AC007029.1-201ENST00000604183 313 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms