Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRBV9A0A0B4J1U6 AC145676.1-201ENST00000514988 2004 ntBASIC19.18■□□□□ 0.66
TRBV9A0A0B4J1U6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 AC060814.1-201ENST00000554326 538 ntBASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRBV9A0A0B4J1U6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRBV9A0A0B4J1U6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV9A0A0B4J1U6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV9A0A0B4J1U6 AL359504.2-201ENST00000605506 1601 ntBASIC19.15■□□□□ 0.66
TRBV9A0A0B4J1U6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV9A0A0B4J1U6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRBV9A0A0B4J1U6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
TRBV9A0A0B4J1U6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.14■□□□□ 0.65
TRBV9A0A0B4J1U6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV9A0A0B4J1U6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 AL157400.5-201ENST00000507624 621 ntBASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV9A0A0B4J1U6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 AC092296.2-201ENST00000589470 999 ntBASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 AC022413.1-201ENST00000624602 984 ntBASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV9A0A0B4J1U6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV9A0A0B4J1U6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV9A0A0B4J1U6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV9A0A0B4J1U6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV9A0A0B4J1U6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV9A0A0B4J1U6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV9A0A0B4J1U6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV9A0A0B4J1U6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV9A0A0B4J1U6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV9A0A0B4J1U6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRBV9A0A0B4J1U6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV9A0A0B4J1U6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRBV9A0A0B4J1U6 ECEL1P2-201ENST00000461596 1295 ntBASIC19.06■□□□□ 0.64
TRBV9A0A0B4J1U6 AC025884.2-201ENST00000553429 711 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms